Brassica napus (rape): 106391816
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Entry
106391816 CDS
T04128
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106391816
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
106391816
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
106391816
NCBI-ProteinID:
XP_022557828
LinkDB
All DBs
AA seq
394 aa
AA seq
DB search
MDHTNKKLVAALLMFFSSFLLMGTSMAASNYNVVDFGAKPDGRTDSTKAFLSAWKSACRS
AASVTVTVPRGSFLLKPVEFRGPCRSRITFQIDGTIVAPSDYRGLGNSGYWILFVEVNRI
SINGGTLDARGASFWACRKSGKSCPAGARSMTFNWANDIVVSGLTSINSQVTHLVINSCN
NVIVRKVKLVAPDQSPNTDGLHVQASTGVTVTDSTFQTGDDCISIGPGTRNLYMSKLNCG
PGHGISIGSLGRDANEAGVQNITLTNSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLVMK
NVQNPIIVDQNYCPTHQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIR
LHDIKLTFNGRSATSTCKNIKGVKAGVVMPQGCL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatcatactaataaaaagcttgtggcggctttgctgatgttcttctcaagcttcttg
ctgatgggtacgtcaatggctgcttccaactacaatgttgtcgacttcggtgctaaaccg
gacggtcgaaccgattcaacaaaagcctttctcagcgcgtggaaatctgcttgccgctca
gctgcaagtgtcacagtaacggtccctagagggagcttcttgttaaaaccggtggagttt
cgtggtccatgtcgcagtagaatcacgtttcagatcgatggaacgattgtagctccttca
gactaccgtggtttgggtaattccggttattggatcttattcgttgaagttaaccggatc
tcgatcaatggaggaactttagatgctagaggtgcatctttttgggcttgtcgaaaatcc
ggaaagagttgtccagctggagccagatcgatgacgtttaactgggcaaacgacattgta
gtgagcggcctaacgtcaataaacagccaagtaacacatttagtgataaacagctgcaac
aatgtaattgtccggaaagtgaagttagtggctccagaccaaagtcccaacacagatggc
ctccacgtccaagcgtctactggtgtgaccgtaaccgatagcacgtttcaaacgggagac
gactgtatctctatcggtccgggaactcgtaacctctacatgtctaaactcaactgcgga
ccaggtcatggaatcagtattgggagtctaggtagagatgctaatgaagctggggtacag
aacataacgttgacaaactctgttttttcgggttcggataatggtgttcggatcaagaca
tgggctagacaaagcacaggttttgtgagaaacgttttgtttcagaatctggtcatgaaa
aacgttcagaatccaatcatcgttgatcagaattattgtccgactcatcaaggctgtcct
aaacagggttctggtgtgaagattagtcaggtcgtgtatagaaatattcaagggacgtct
cgaacacaacaagctttaacgtttgattgcagtcgtagtaacccatgccaagcaattaga
ttgcacgatattaagctgacgttcaacggacggtcggctacttcgacgtgtaagaatatt
aaaggagttaaggcgggtgtggtaatgccacaaggttgtctttga
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