Brassica napus (rape): 106392023
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Entry
106392023 CDS
T04128
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106392023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106392023
03036 Chromosome and associated proteins [BR:
bna03036
]
106392023
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106392023
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
106392023
Chromatin remodeling factors
BAF complex
106392023
PBAF complex
106392023
GBAF(ncBAF) complex
106392023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
106392023
NCBI-ProteinID:
XP_013688247
LinkDB
All DBs
Position
C4:62267095..62275875
Genome browser
AA seq
2142 aa
AA seq
DB search
MQSGGSGGGPARGMGPAGRTNSTSSAASPTSSSSSVQQQQQQQLASRQQQGRNSEANDGM
FAYHPGGVQGMMGGGNFGSPSGSMQHPQQPRRLFDSPQQQQQQPQGSSQDGQQSFNPMQQ
AYLQFALQAQQQKVQQHARMGMMQGAMQQASNQAQGSSSNPSAEQFARGERQMESGHETK
PHPQQVGTGQLMPGNITRPMQAPQGPQGVNNMGSNQLAFSQQWQAMQAWARERNIDLSHP
ANASQMSHILQGRMAAQQKSNEGNVASPSPSIPVSSQPSSSSGVPGENSPRPNSAGDISG
QSGSGKARHAISTSSFASTSSPRMMNPAANPFSAQGRDNPMYPRHLVQPTNGMPSGNSMQ
TSANETHVLDHNASTNKGLGSAEHLQMQQPRQMNAPSPKAVLSDAGLLSKSSLQIGQGIK
QEQQRSGFTKQQLHVLKAQILAFRRLKKGEGSLPQELFKSIAPPPLEVQTPLQIFPVKVH
VQDRSSDKTVENQARSLEPGKESQTAASSNGQIFAKEEDNGGDTEVPLAMGHSQLFQNLG
KEAASTTAATKEEQQTDVFPVKSDQGADASTQQTPRSDSNADKGKAVASDGGQSNVPAQA
NSPQQPKDTASARKYHGPLFDFPFFTRKYDTYGSATANANNNLTLAYDIKDLICEEGAEF
FNKKRTDSLTKINGLLARNLERKRIRPDLVLRLQIEEKKLRLSALQSRVRDEVDRQQQDI
MSMPDRPYRKFVRLCERQRLEMNRQVLANQKAVREKQLKTIFQWRKKLLEAHWSIRDART
ARNRGVAKYHEKMLREFSKRPDDGRNKRMEALKNNDVERYREMLLEQQTNIPGDAAERYN
VLSSFLTQTEDYLHKLGGKITATKNQQEVEEAANAAAIAARLQGLSEEEVRAAAACAREE
VLIRNRFVEMNAPKDNSSVNKYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLY
NNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSV
SCIYYVGTKDQRSKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKVDWKYIVIDEAQRMKD
RESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQR
EGPSHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSVVLRCRMSSIQ
SAVYDWIKATGTLRVDPDDEKLKAQKNPIYQAKIYKTLNNRCMELRKTCNHPLLNYPYFN
DLSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDG
TTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVA
RAHRIGQTREVKVIYMEAVVEKMSSHQKEDELRSGGSVDLEDDLAGKDRYIGSIEGLIRN
NIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIA
RSEEEVELFDQMDEEFDWTEEMTCHEQVPKWLRASTREVNATVADLSKKPSKNMLSSSNL
IVQTGGPGGERKRGRPKSKKINYKEIEDDIGLFSEESSEEVNVDSGNEEEGDIGQSDDDE
LTGALGDQQTNNGESDGENPVAGYDYPPRSGSYKKVPPQDDAGSSESSPESHRSKEMASP
VSSKKFGSLSALDTRPGSVSKRLVDDLEDGEIGASGDSHIDLQRSYDRDEGGGEQVLQPT
IKRKRSIRLRPRQTAEGTDGSDMPAAQPLQGDRSYRSKLRTVADSHGSRQDQSDSSSRLR
SLPAKKVANTSKLHVSSPTSGRLNATQLPVEDNDEAARETWDGTSHIGSSNAGARMSHII
QKRCKTVISKLQRRIDKEGQQIVPMLTNLWKRIQNGYAAGGVNNLLELREIDQRVERLEY
LGVMELASDVQYMLRGAMQFYGFSHEVRSEARKVHNLFFDLLKMSFPDTDFREARNALSF
SGPSPTLVSTSSPRGAGGISQGKRPKPVDEEEPEPSSQQRENSRIRVQIPQKETKLGGTS
SHTDESPILAHPGELVICKKKRKDREKSGPRTRTAGSSSPVSPQAMIGRGRRSPVSGSVT
RETRLAQATHPNNSGAAGDSVGWANPVKRLRTDSGKRRPSHL
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggaggcagtggcggaggccccgcccggggcatgggtccggcgggtcggacc
aactccacatcatccgctgcgtctccgacttcttcatcttcatccgtgcaacagcaacag
cagcagcagttggcgtctaggcagcagcaggggagaaactcagaggcaaatgatggcatg
ttcgcgtatcatcctggcggggttcaggggatgatgggaggtggtaactttggttctccg
tctggctctatgcagcaccctcaacagcctaggagattgtttgactctcctcaacaacaa
caacaacaaccacagggctcttcccaagatggccagcaaagttttaatccgatgcagcaa
gcgtatcttcagtttgctttacaggcgcagcaacaaaaggtgcagcagcatgctagaatg
ggaatgatgcaaggcgcgatgcagcaggcatctaatcaggcacagggctcgtcgtctaat
ccatcggctgaacagtttgctcgcggtgaaaggcagatggaatcaggtcacgaaacaaaa
ccccatccccagcaagttgggactggacaactaatgcctggaaatattacaaggccaatg
caggcaccacagggtccgcagggtgtgaataatatggggtccaaccaactcgcgttttca
cagcagtggcaggccatgcaggcgtgggcgcgggagcgtaatattgatctctcgcatcct
gccaacgccagccaaatgtcgcacatactccagggaagaatggctgcccaacagaagtct
aatgaaggaaatgtggcttcaccgtcaccgtctattccagtgtctagccagccatcttca
tcttcaggcgttccaggtgagaactcgcctcgtcccaactctgctggtgatatctctggg
cagtcaggatcaggaaaggccagacatgcaatatctaccagctcatttgcctcgacttcc
agtcctagaatgatgaacccagctgcgaatccattctctgcccaagggagagataatcca
atgtatcctcgccatttagttcagcctacgaatgggatgccctctggaaattccatgcag
acgtctgcgaatgagacacatgttttggatcacaatgcttctacaaataaaggtttaggt
tctgctgaacatttgcagatgcagcagcctaggcagatgaatgcacccagtccaaaagct
gttctatctgacgctggtttactcagtaaatcttcccttcagattggacaggggatcaaa
caagagcaacagcgatcaggatttaccaaacaacaactccatgttctcaaagcccagata
ctggcatttcgtcgtttgaagaaaggagaaggttctttgcctcaggagctttttaaatct
attgctccaccaccgcttgaagtgcagactccgttgcagatttttcctgtgaaagtacat
gttcaggataggtcttcagacaaaactgtagaaaaccaagcaaggtcactggagcctggc
aaagagtctcagactgctgcttcttcaaatggacagatttttgctaaagaggaagataat
ggtggagatacagaagtaccattggcgatgggccacagccaattatttcaaaatctggga
aaagaagctgcttctactactgcggctacgaaagaggagcaacaaactgatgtattccct
gttaagtcagaccaaggagcagatgctagtactcaacagactcctagaagtgattctaat
gctgataagggaaaagctgttgcatctgatggaggccaatctaatgttccggcacaagca
aactctccccagcagcctaaggatacagcctccgccaggaaatatcacggaccattgttt
gattttccctttttcactcgaaaatatgacacttatggatctgcaacagccaatgccaac
aacaatctcacattagcttatgatatcaaagacctgatctgtgaagaaggtgcagaattc
ttcaacaagaaaagaacagatagtttgacgaagataaatggtctcctagcaagaaacttg
gaaaggaaaaggattaggccggatcttgttttacggcttcagattgaagagaaaaagctc
aggctatcggctcttcagtctcgtgttagagatgaagtggatcgacaacagcaggatata
atgtccatgcctgataggccataccgtaagtttgtgaggttgtgcgaacgacaacgcctt
gaaatgaatagacaagtactggccaaccagaaagctgttagagaaaagcagctgaaaacc
atttttcagtggcgtaagaaactccttgaggctcactggtctatacgtgatgcacgcact
gctcgtaacaggggagttgccaaataccatgaaaagatgttgagagagttctcgaagaga
ccagatgatggccggaacaaaaggatggaggcactgaaaaataatgatgtagaaaggtac
agggagatgttgctggaacagcaaacaaatatacctggtgatgctgctgaaagatataat
gttctctcttcatttttgacccaaacggaagattatctccataaacttggaggtaagatt
actgccacaaagaaccaacaagaagtggaggaagcagcgaatgctgcagcaattgcagcg
agattgcagggcctttcagaagaagaggtcagggcggcagctgcttgtgctcgggaagaa
gttctgatcagaaatagatttgtggaaatgaatgcgccaaaagataattcatctgttaac
aagtattatactctggctcatgctgtaaatgaagtcgttgtgagacaaccgtcgatgctc
caagctggaactttgcgtgattaccagctggttggattgcaatggatgctctccttgtat
aataacaaattaaatgggatcttggctgatgagatgggtcttggaaaaactgtgcaggta
atggcactgattgcttaccttatggagttcaaggggaattatggaccacatctcatcatc
gttcctaatgctgttctggtgaactggaagagtgaactccatacttggctgccatccgtt
tcatgcatatattatgttggtacaaaggatcaacgttcaaaattgttctctcaggaggtt
tgcgccctgaagttcaatgtcctcgttacgacttatgagtttattatgtatgatcgatca
aaactctcaaaagttgactggaaatatattgttattgacgaagcacaacggatgaaggac
agagaatctgttttggcccgcgatcttgatcgttatcgctgccagaggagattacttctc
actgggacacctctacagaatgatctgaaagagctttggtcactattgaatctcctcctt
cctgatgtctttgacaatcgaaaagcatttcatgattggttcgctcaaccctttcaaaga
gaaggtccttcgcataatatagaggatgactggctggagactgagaaaaaggtcatagtc
attcacaggcttcatcaaattttagagccgttcatgctcagacgtcgtgttgaggatgtc
gaaggttcacttcctcctaaggtttccgtagttttaagatgtaggatgtcttctattcag
agtgccgtttatgattggatcaaagctactggaactctaagagttgatccagacgatgaa
aaacttaaggctcagaagaatccgatctaccaagccaagatatataaaactttaaacaat
aggtgcatggagttgaggaaaacatgtaatcatccattgctcaattatccatatttcaat
gatctttccaaggattttctcgtaaggtcatgtggaaaattgtggattctggatagaatt
cttataaagctacagaggacaggccatcgtgtattactcttcagtacaatgactaaactc
cttgatatcttggaagagtatttgcaatggaggaggctcgtataccgcagaatagatggg
actaccagtctagaagatcgggaatcagctattgtggatttcaatgatccggatactgat
tgctttattttcttgcttagtatacgtgcagctggaaggggtctcaaccttcagactgct
gacacagttgtgatatatgatccggatccaaaccccaagaatgaggaacaagcagttgcc
agagcccatcgtattgggcagacgagggaagtaaaagtgatatatatggaggcagttgtt
gaaaaaatgtctagccatcaaaaggaggacgagcttagaagtggtggttcagtagaccta
gaggatgacttggctgggaaggaccggtatataggatctattgagggtctcataaggaat
aatattcagcagtacaagattgacatggctgatgaagtcattaatgctgggcggtttgac
caaaggacgactcatgaagagcggcgaatgacattggagactttattgcatgatgaagag
agatatcaagaaaccgtccatgatgtaccttctctccatgaggtgaacaggatgattgcc
agaagcgaggaggaagttgagttattcgatcagatggatgaagaatttgactggaccgaa
gagatgacttgtcatgaacaggtgcctaagtggcttcgagctagtaccagagaggtgaat
gctaccgttgcagatttgtctaagaaaccgtcaaagaacatgttgtcaagcagtaatcta
attgtgcaaactggcgggcctggaggtgagagaaaaagagggcgtcccaagagcaaaaag
attaactacaaggaaattgaagatgacattggattattctctgaggaaagctctgaggaa
gtgaacgttgattctgggaacgaagaagagggagacattggacaatctgatgatgatgag
ctaactggtgctcttggtgatcaacaaaccaacaatggcgaatctgatggagagaacccc
gtcgctggttatgattatcctccgcggtctggtagttataaaaaagtccctccacaggat
gatgctggttcttcagaatcttcgccagaaagtcatagatcgaaagagatggcttctcct
gtttcttcaaaaaaatttggctctttgtctgcattggacactaggccaggttctgtctcg
aaaagactggtagatgacctagaagatggggaaataggagcctctggggattctcacata
gatctccaacgatcctatgaccgtgatgaagggggaggagaacaggttttgcaacctaca
ataaaacggaaacggagtattcgtctaagaccccgtcaaacagcagaaggaacagacggt
agtgatatgcctgcagctcagccattgcaaggcgatcgtagctatcgatcaaaattgaga
acagttgctgactcgcatggttcaagacaagatcagagtgattcatcctcgagacttcgg
agtttacctgcaaagaaggtagctaatacttccaagctgcatgtatcatcaccaacatct
ggtagattgaacgccacacagcttcccgtggaggacaacgatgaagctgctagagaaaca
tgggatggaactagtcatataggctcttcaaatgcaggtgcaagaatgtcccacatcata
cagaaacggtgcaaaaccgtcattagcaaactccaaaggagaatcgacaaggaaggtcag
cagattgtgcctatgctgacgaatttgtggaagagaattcagaatggttatgcagctgga
ggtgtgaataatcttttggagctacgagagatagatcagcgggtggaaaggctagagtac
ttaggagttatggaactcgcatctgacgtgcagtatatgctaaggggagcaatgcaattc
tatggattctcacacgaggtgagatctgaagcaaggaaggttcacaacctcttctttgat
ctactgaaaatgtcttttccagacacagacttccgggaagcaaggaacgctctttccttc
tctggcccaagcccaactttggtatctacatcgtccccaagaggagcaggtggtattagt
cagggtaagaggccaaagccagtagacgaagaggaaccggagccaagctctcaacaacgc
gagaactcaaggatcagagtacagatacctcagaaagaaacaaagcttggcgggacatca
agccacaccgatgagtctccaattctagctcatccaggggagctagtaatctgcaagaag
aagaggaaagacagagaaaagtctggtccgagaacccgaaccgctgggtccagcagcccg
gtttcgcctcaggctatgataggtcgtggtcgtagaagtccagtgtcaggttcggttaca
agggaaacaaggctagctcaagctactcatccaaacaacagcggtgcggctggtgattca
gttggatgggctaatccggtgaagaggctaagaacagattctggtaaaagaaggccaagt
catttgtag
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integrated database retrieval system
