Brassica napus (rape): 106392113
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Entry
106392113 CDS
T04128
Name
(RefSeq) probable sphingolipid transporter spinster homolog 3 isoform X2
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106392113
Transporters [BR:
bna02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
106392113
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GFIT
Motif
Pfam:
MFS_1
OATP
MFS_3
Motif
Other DBs
NCBI-GeneID:
106392113
NCBI-ProteinID:
XP_013688342
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Position
C4:48377153..48380163
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AA seq
527 aa
AA seq
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MVTKEDDCLPPAAEPSRCCSPSSTTPPAELETIRSLEIVESSFLSPVWLLVIFCIINLLN
YMDRGAIASNGVNGSTKSCNDKGKCIPATGIQGHYNLSNFEDGVLSSSFMVGLLIASPVF
ASLAKSFNPFRLIGVGLTVWTVAVVGCGSSFAFWFIVLCRMFVGVGEASFISLAAPFIDD
NAPHKQKAAWLGLFYMCIPSGVALGYVYGGYVGKHFSWRYAFWGEAVLMAPFAVLGFLIK
PLQLKGFPSTDSVEVMASSLGAEVSKNNNHLQAGNEIKHDEVEVSIEIGRSSYANTVWKS
ITQFARDMKVLCKERVFVVNVLGYVAYNFVIGAYSYWGPKAGYNIYKMKNADMIFGAVTI
ICGIVGTLSGGLILDHVTSTIPNAFKLLSGATFIGATCCFTAFTLKSLYGFVALFAIGEL
LVFATQAPVNYVCLHCVEPSLRPLSMAISTVAIHIFGDVPSSPLVGIVQDHIDSWRKTAL
ILTSVLFLAAAIWFIGMFINIVDRFNEEAESENPRSRQEQSIMVMNS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaaagaagatgattgtcttcctccagcggcagagccgtcgagatgttgttct
ccttcttctacgactcctcctgcagagctagagactattcgaagcttagaaatcgtggaa
tcatcctttctctctcccgtttggttactagtgatcttttgcatcattaacttattaaac
tacatggatcgaggtgcgatagcaagcaatggtgttaatggaagtaccaagagttgtaat
gataagggcaaatgcattcctgcaactggaattcagggacattataacctaagtaatttt
gaagatggtgtattgtcatcttccttcatggttgggcttcttattgcatccccagtcttt
gcttcattggcaaagagcttcaatccatttagacttattggagtaggtttaactgtttgg
actgttgcagttgtcggctgtggcagttcctttgccttttggtttatcgtcttatgtcgc
atgtttgttggtgtaggtgaagcttctttcattagtcttgcagctccatttatagatgat
aatgctcctcataaacagaaagctgcatggcttggactgttttacatgtgtataccaagt
ggtgttgctcttggttatgtctatggcggatacgtcggaaaacattttagctggcgctat
gcattttggggagaagcggttttaatggctccattcgctgttcttggtttcttgataaaa
cctttgcagttaaaagggttcccttctactgattcagttgaagtaatggcttcatcacta
ggtgcagaggtatcgaaaaacaacaaccatcttcaagctggtaatgagattaagcatgat
gaagttgaggtctctattgagattggcaggtcaagttacgctaacacagtttggaaatca
ataactcaatttgcgagagacatgaaagtcctatgcaaagaaagggtctttgttgttaat
gtcttaggttatgtagcatacaattttgttattggtgcatattcatattggggaccaaag
gccggttataacatttataaaatgaaaaacgctgatatgatctttggggcagtaactatc
atttgtgggatcgttggaacattatcaggtggcttaatactagatcatgtcacttctaca
attccaaatgctttcaagctcttatccggagcaacatttatcggggcgacatgttgcttt
actgcattcaccttgaagagtttatacggtttcgtagctcttttcgccataggagagctt
cttgtgtttgctacacaggctcctgtgaattatgtgtgtttgcattgtgtggaaccaagt
ttaagaccactatcaatggctatctccactgtggcaattcacatatttggcgatgttcca
tcttcgccacttgtcggtattgttcaggatcatatcgacagttggagaaaaacagcgctg
attcttacatcggttctgttcttagctgctgcaatatggtttatagggatgttcataaac
attgtagatcgctttaacgaagaagctgaaagtgagaacccgagaagcaggcaagaacaa
tcgattatggtgatgaattcataa
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