Brassica napus (rape): 106392309
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Entry
106392309 CDS
T04128
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106392309
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106392309
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
106392309
Ion channels [BR:
bna04040
]
Other channels
Mechanosensitive channel (Piezo)
106392309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
106392309
NCBI-ProteinID:
XP_013688576
LinkDB
All DBs
AA seq
2539 aa
AA seq
DB search
MSFDSSIDFHFPIPKSPSRAATFLPDFFSSSSACGGERKLGWNRWELGHGDLLASLLMAS
FLLGFFLPSLLLAASLINWSLISFFDLIAFLLLHYIAPEIGYRFQRRHWLLWPIFIFSFA
VLVAQALYLVLWATVGQHWDTSDSAWMSVIGFIILKSWRNPTVLYFLALQLLASLVALAD
IYSSRFGFVRWRWSRFSELFEHLGSHLRVASCLFLPAVQLALGICNPSWVSLPFFVGSCA
GLVDWSLTSNVSGLFRWWRVLYIYAGFNIVLLYLYQLPINFSDMIRWIASFIGLFRLSAE
TEGTDICSGLFLLLFYIMLSYIRSDLEDMDFIMSPSENNLAERLLPAKYSFFIRESRAGV
RHTNVLLRGAVFKTFSINFFTYGFLVSLFALSFWSFHFASLCAFGLLAYVGYIIYAFPSL
FRLHRLNGLLLVFILLWAVSTYIFNVAFSFLNTKTGKDMKIWEMVGLWHYTIPGFFLLAQ
FGLGMLVALGNLVNNSVFLYLSEESSRSSNDRSYAEADEETKVLVVATIAWGLRKCSRAI
MLALIFLIAMKPGFVHAVYVIFFLMYLLSHNINRKIRKSLILLCEVHFALLYILEIDLVS
NSLKRQGSVSRDILFQLGLLRSESSWDFLEIALLACFCAIHNHGFEVLFSFSAIVRHTPS
PPIGFSILKAGLNKSVLLSVYSSPSSSYSQDNTTYERHIASFLSAIGQKFLSMYRSCGTY
IAFVTILISVYLVKPNYVSFGYIFLLLFWITGRQMFEETKRRLWFPLKAYAVLVFMFIYC
LSSFVSFQLWLSGFIDLYFYLGYNSEAPLLDNVWESLAVLIVMQLYSYERRQNGHYIPGQ
SSLVHPGVFGFLERFLVWHGQKILFAALFYASLSPISVFGFVYLLGLVICTTFPKSSSVP
SKSFLIYTGFLVSAEYLFQLWGMQAQMFPGQKYAELSFYLGLRVYEPGFWGIESGLRGKV
LVVAACTLQYNVFRWLERTPGLTIIKGKYEEPCPLFVSAEGTTASVSSSNGENPSSIDHA
SISIKQGEATSNSWPFFSPRDNQAAGFLHPKTEGSESGSSKKFSFGHFWGSIKESHKWNK
RRILALKKERFETQKNLLNIYLKFWIENMFNLYGLEINMIALLVASFALLNAISLVYIAL
LAACVLLRRRLIQKLWPVVVFLFASILAIEYVATWNNLLPLDQDPSETSVHCHDCWSIAA
VYLKFCRDCWLGVRVDDPRTLISYFVVFMLACFKLRADQISSFSESSTYHQMKSQRKNSF
VWRDLSFETKSMWTVLDYLRLYCYVHLLDVVLILILITGTLEYDILHLGYLAFALVFARM
RLEILKKKNKIFRFLRVYNFVLIIFSLAYQSPFVGNFNDGKCETVDYIYEVIGFYKYDYG
FRITARSALVEIIIFMLVSLQSYMFSSQEFDYVSRYLEAEQIGAIVREQEKKAARKTEQL
QQIREAEEKKRQRNLQVEKMKSEMLNLRVQLHRMNSDSNFGFASPRTEGLRRRRSSYLIP
DSGAASPEIDGVVHRKEGQPIDEDTQYPFEAHELPMSATPEAPDSPECSFGASPCEITEI
QHNADVMSTEREIKEKSEGKDNALISAVQLIGDGVSQVQFIGNQAVNNLANFLNISPENS
DINEQSSVDDEVYDEMESQNRIHKPFERSTSLQSDRSSDGASFQIGRILRHIWSRMQSNN
DIVCYCCFIIAFLWNFSLLSMVYLAALFLYALCVHTGPTHIFWVVMLMYTEIYILLQYLY
QIIIQHCGLSIDAPLLQELGFPTQRIKSSFVVSSLPLFLVYISTLIQSVITVKDGDWVPS
ADFASRRNARGSQKDLTRINWSLRVWDVYKKLRDGVKLVIRSMYRYWISLTRGAESPPYF
VQVTMDVHMWPEDGIQPERVECRMNQLLRLVHNERCEKGNPDLCPYSSRVHVQSIERSTE
TPNEALVVLEVEYASPTNGCSTAEWYKSLTPASDVAKEIRKAQHSGLGEGTGFPYPILSV
IGGGKRETDLYAYIFGADLMVFFLVAIFYQSVIKNKSEFIDVYQLVDQFPFDFVIILMVI
FFLIVVDRVIYLCSFATGKVVYYLFSLILFTYAVTEYAWSIYPTQQHAAGLALRFIFLAK
AMSLALQAIQIRYGLPHKSTLYRQFLTSEVSRINYYGYRLYRALPFLYELRCVLDWSCTA
TSLTMYDWLKLEDVNASLYLVKCDTVLNRATHKHGERQTKMTKCCNGICLFFILLCVIWA
PMLMYSSGNPTNIANPIKDASVQIDIKTAGGKLTLYQTTLCERISGDNIDLGLDLGSQSF
LPTYNKNDIQLICCQADASVLWLVPDTVVTRFIQSLDWDTDMDITFSWLLNRDRPKGKET
VKYERSVDPQDLPKRSDVQMVLNGSMDGFRVHNLYPKFFRVTGSGDVRSFEDQTDEVSAD
ILMNHADTKWWWSFHNLKASENISACEGMDGPVAIIMSEETPPQGFLGDTLSKFSIWGLY
ITFVLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDLYAARAEGELGVEEVLYWTLV
KIYRSPHMLLEYTKLDYDA
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcctcgatcgatttccattttccaatccccaaatcccccagcagagca
gctacctttttgcctgatttcttctcctcctcctcggcgtgcgggggggaacgtaaactt
ggttggaatcgatgggaattgggacatggtgatctgcttgcttctcttctcatggcgagt
tttctcctcggcttcttcttgccttcccttcttctcgcagcttcacttattaactggagt
ctcatatcattctttgatctgatagcttttctcctccttcactatattgcacctgaaatt
ggataccgttttcagaggagacattggctattatggcccattttcatcttttcctttgcc
gtacttgttgcacaagctctctaccttgtcctttgggctactgttggtcaacactgggat
acatcagattctgcttggatgagtgttattggctttatcatactaaagtcctggagaaac
cccactgttctgtatttcttggctttacaacttttagcatcgctagttgctttagctgac
atatacagttctagattcggcttcgttcgatggcgatggtctcgcttttctgaacttttc
gagcatctaggaagtcatcttagggttgcctcctgcttgttcttaccagcagttcaattg
gcactgggaatttgcaatccttcatgggtttctttgccatttttcgttggcagctgtgct
ggtcttgtggactggtccttgacaagcaacgtttcaggacttttcaggtggtggagagtt
ctttatatctacgcaggattcaacattgtcctactttacctctatcaactaccaataaac
ttctccgatatgattcgatggatagcaagctttataggtctattcagactctctgcggaa
acagaaggcactgatatttgttctggtcttttccttttgcttttttacatcatgctatcc
tatataaggtcagacctcgaggatatggattttatcatgtcgccgagtgaaaataacttg
gcagagcgtcttcttcctgcaaaatattcgttttttattcgagaatcaagggccggtgtt
aggcacaccaatgttttactgaggggagctgtgtttaagaccttcagtatcaatttcttc
acatatggtttcctggtctctctgtttgctctttcgttctggagttttcattttgcgagc
ttgtgtgcttttggcctccttgcatatgttggttacattatctatgccttcccatcgttg
ttccgcttgcacagattaaacggccttctgcttgtatttatactcttatgggctgtcagt
acgtacatattcaatgtagcattttcttttctgaacactaagactggaaaggacatgaaa
atttgggagatggtgggactttggcattacactatacctggattctttttgcttgcacaa
tttggtttgggaatgttggttgcgttgggtaatcttgtgaacaactctgtttttctctac
ctgtctgaagagagctccagatcttccaatgacagatcttatgctgaagctgatgaagaa
acaaaggtgttggttgtcgcaaccattgcttggggattgcggaaatgttcacgggctatt
atgctcgcactgattttcctcattgccatgaagcctgggtttgtccatgcagtgtatgtg
atattcttcctgatgtatctgctgagccacaacatcaacagaaagatacgcaagtcactg
attcttctatgcgaagttcattttgcacttctctacattcttgagatcgaccttgtgtcg
aactccttaaagcggcaaggctctgtgagcagagatattctgtttcagttaggtctcctt
aggtctgaaagctcttgggatttcttggagatagccttgcttgcttgcttctgtgctatc
cataatcatggttttgaggtgctattttccttctcagcaattgtacgacacacaccaagc
cctccaattggatttagcatattgaaagctggtctcaacaaatcagttctcttgtccgtc
tactcatcgccatcttcaagttatagccaagataatactacttatgagagacacattgct
tcatttctgagtgcgattgggcaaaagtttctgtctatgtaccgatcatgtggaacatac
attgccttcgtcactattctcataagtgtatacctggtgaaacccaattatgtatcgttt
ggatacattttccttctcttgttctggattactggaagacaaatgtttgaggaaactaag
agacgcttgtggttccctttgaaagcatatgcggttttagtgtttatgtttatctactgc
ttaagtagctttgtcagcttccagctctggttatctggatttattgatctatacttttat
ttaggctacaactctgaagcaccattgctggataacgtatgggaatctcttgctgtgttg
atcgtgatgcaactttacagctatgaaaggaggcagaatggacattacattccaggtcaa
tctagtttggttcatcctggagtttttggttttcttgagaggtttttggtatggcatggt
cagaagatcttgttcgcggcattgttttatgcatcattgtctccaatcagtgtgtttgga
tttgtatatctcctcggccttgtcatctgcacaaccttcccaaagtcttcttcagtacca
tccaaatcatttttgatctatactggatttctcgtgtctgctgagtatcttttccaactg
tggggcatgcaagctcagatgttccctgggcaaaaatatgcggagttgtctttctacttg
ggccttcgagtatatgaacctggattttggggtatagaatcaggtctacgaggcaaagtg
ctggttgtcgctgcctgtactctgcagtacaatgtatttcgttggctagaaaggacacct
ggtttaactattatcaaaggaaaatatgaagagccttgtcccctatttgtctctgcagaa
ggcacaactgcaagtgtttccagttctaatggtgaaaacccatcttccatagatcatgct
tctatatcaattaaacaaggcgaggctactagtaactcatggcctttcttctctccccgt
gataatcaggcagctggtttcttgcatcccaagactgaaggctctgaaagtggcagtagt
aagaaattttcatttggtcatttctggggaagcatcaaagagagtcacaagtggaacaag
aggcggattctggcattgaagaaggagaggtttgagacgcagaagaatctgttaaatatt
tacttgaagttttggattgagaacatgtttaacctctatggccttgagataaacatgata
gcgctgcttgttgcaagttttgctttgctgaatgccatctccttggtatatattgcgctg
cttgctgcgtgtgtcctcttgagaagacgcctaattcagaaactatggcctgtcgttgtt
tttctgtttgcatcaattctcgcaattgaatacgttgccacgtggaataacttattgcct
ttagatcaggatccaagtgaaactagcgtgcattgccatgattgctggagtattgcagct
gtctacttaaaattttgccgggactgctggctgggagtgagagttgacgatccccggacc
cttattagctatttcgtggtgttcatgcttgcctgttttaaacttcgggctgatcagata
tctagtttctcagagtcatcgacatatcatcagatgaagtctcagagaaagaactcattt
gtctggagagatctctccttcgaaacaaagagcatgtggaccgtgcttgattacctgagg
ctttattgttacgtccatctgttggatgttgtgcttattctgattctaatcacaggaact
ctcgagtatgacattctacacctgggctatcttgcattcgcacttgtttttgcccggatg
cgacttgaaatactgaagaagaagaacaaaatattcaggttcttgcgggtgtacaatttt
gttctcatcatcttttctctcgcatatcagtctccatttgttggaaacttcaatgatgga
aagtgtgaaacggttgattatatttacgaggtgattggattttacaagtatgactacggg
tttcgaatcactgcaagatctgctctcgttgagatcatcatatttatgttagtatctctt
cagtcctacatgttttcctcccaggagtttgattatgtctcgcggtatcttgaagcggag
caaattggtgctattgtgcgggagcaagagaagaaagctgcacgaaagaccgagcaactg
caacagattcgtgaggctgaagaaaagaaacggcagcggaatttgcaggtggaaaagatg
aagtcagaaatgctgaacctgcgggtacagcttcacagaatgaattctgattctaatttt
gggtttgcttctccgcgcactgaaggtctacgaaggaggaggagttcgtatctaattcca
gatagtggtgcagccagtccggagattgacggagtggtccacaggaaagaaggccagcct
attgacgaggatacacagtatccttttgaagctcatgagcttcctatgagtgccacgcca
gaagcaccagattctccagagtgttcatttggagcatctccttgtgagatcactgaaatt
caacacaatgctgatgtcatgtctacggagcgtgaaataaaagaaaagtcagaaggaaaa
gataatgccttgatttctgctgtgcaactcatcggtgatggcgtttcccaggtgcaattt
attggaaatcaggcagtaaataaccttgcgaatttcttaaacatctcaccagaaaattca
gatataaatgagcagtcctctgttgatgatgaggtgtatgatgagatggaaagccagaat
agaatacacaaaccttttgaacggtcaacatctctacaatcagacaggagtagtgatggc
gctagctttcagataggaaggatccttcgtcatatatggtctaggatgcagtccaacaat
gacattgtttgctattgctgcttcattattgcgtttctgtggaacttcagtcttctttcc
atggtctatctagcagcgctgttcctatacgccctctgcgttcacactggacctactcac
atcttctgggtcgtcatgctaatgtacacagaaatctatatcctcctccagtacttatac
cagattataatccagcactgtgggttgagtattgacgcaccacttcttcaagaactggga
tttccaacgcaaagaatcaaatcatcgtttgttgtcagctcgttgcctctcttccttgtt
tatatatccactctcatacagagtgttataacagtgaaagatggtgactgggttccttct
gctgatttcgcttctcgccggaatgcccgtgggagccagaaggaccttacaagaattaac
tggagcctgagagtttgggatgtgtacaagaagctgagagatggtgtgaaattggtgatc
agaagcatgtatcggtactggatctctctgacacgtggagcagaatcccctccttacttt
gttcaggtgacaatggatgttcacatgtggcctgaagatggaattcaacctgaaagagtt
gaatgcagaatgaatcagttgcttaggcttgtccataatgagagatgcgagaagggaaac
cctgatctttgtccttactctagcagggtccacgtacaaagtatagagagaagtacagag
accccaaacgaggccttggttgtgctcgaggttgagtacgcgtctcccacgaatgggtgt
tctacagcagaatggtacaaatcactaacaccagcctcggatgtggcgaaagagattcgt
aaagctcaacatagtggacttggtgaaggaactgggtttccgtaccccattctctctgtg
attggcggaggaaagagagaaacagacctctatgcctacatatttggtgctgatttgatg
gtcttctttctggttgccattttctaccaatccgtcatcaaaaataaaagcgagtttatc
gatgtatatcagctagtggaccagttcccatttgactttgtcattattctaatggttatc
ttcttcctgattgttgttgatcgggtcatctatctttgctcctttgcgactggaaaagtg
gtgtactacctcttcagtcttattctcttcacatatgcagtgacagagtatgcttggagc
atatatcctacgcagcagcatgctgctggcttggctctcagattcatatttcttgccaaa
gcaatgtcactagctctccaggccatacaaatccgctatgggctacctcataagagcacc
ttatatcggcagtttttgacaagtgaagtttcacggatcaattactatggctacagactt
taccgtgctcttccttttctgtatgaattgagatgtgtacttgactggtcctgcacagcg
acatcactgactatgtatgactggctcaagttggaagatgtaaatgcgagtctgtacctt
gtcaaatgcgatacagttttaaatcgtgctacacacaaacatggagagaggcaaacaaaa
atgactaaatgctgcaacgggatatgtctgttcttcatcttgttatgcgttatctgggct
cctatgctgatgtatagcagtggtaacccaacaaacatcgcaaatccgataaaagatgcg
agcgttcagattgatataaaaacagctggtggaaagcttactttgtaccaaacaaccctg
tgcgagagaatttcaggggataacattgatctcgggctagatctcgggtcccaaagcttc
ttgccaacgtacaacaaaaatgacatccagctgatatgctgccaagctgatgcaagcgtt
ttgtggcttgtccctgacacagttgtgaccagattcattcagtccctcgactgggacaca
gatatggacatcaccttttcttggcttcttaacagagaccgacctaaaggtaaggagact
gtcaagtacgaaagaagtgtggaccctcaggaccttccaaaacgctctgatgtgcaaatg
gttctcaacggctcaatggatggatttagagtgcataacttgtacccaaagtttttccgt
gttactggttctggtgatgtcaggtcttttgaagaccagacggatgaagtgagtgcagac
atactcatgaaccatgcagataccaagtggtggtggtcattccataatcttaaggcgtct
gaaaatattagcgcttgcgagggtatggatggaccagttgctatcataatgtctgaggaa
actcccccacaggggtttctgggtgacacgctcagcaaattcagtatatggggactctat
ataacatttgtactagcagtcgggcgtttcatcaggcttcaatgctctgacctgcgtatg
agaataccatacgagaacctcccttcgtgtgacagattaatagcaatatgtgaagactta
tacgcggcgagagcagagggtgagcttggagtagaagaagttctatactggacccttgtg
aagatctatagatctccacacatgctgcttgagtatacaaagctagactacgatgcttag
DBGET
integrated database retrieval system
