Brassica napus (rape): 106392332
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Entry
106392332 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106392332
00071 Fatty acid degradation
106392332
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106392332
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106392332
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106392332
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106392332
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106392332
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106392332
Exosomal proteins of breast cancer cells
106392332
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
106392332
NCBI-ProteinID:
XP_013688602
UniProt:
A0A078IPS6
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Position
A4:21970426..21979943
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AA seq
660 aa
AA seq
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MKSFAAKVEDGVRGENGKPSVGPVYRNLLSEKGFPPIDSDITTAWDIFSKSVKKFPDNKM
LGWRRIVDEKVGPYMWKTYKEAYEEVLQIGSALRALGAEPGCRVGIYGVNCPQWIIAMEA
CAAHTLICVPLYDTLGSGAVDYIVDHAEIDFVFVQETKIKGLLEPDCKCARRLKAIVSFT
NVSEEHNLKASEVGVKTYSWFDFLQMGCEKPEETTPPKPFNICTIMYTSGTSGDPKGVVL
THEAVATYIVGMDLFMDQFEDKMTDEDVYLSFLPLAHILDRMNEEYFFRKGASIGYYHGD
LNVLRDDIQELKPTYLAGVPRVFERIHEGIQKALQELNPRRRFIFNALYKHKLAWLNRGY
SHSKASPMADFIAFRKIRDKLGGRIRLLVSGGAPLSTEIEEFLRVTCCCFVVQGYGLTET
LGGTAMGFPDEMCMLGTVGIPAVYNEIRLEEVAEMGYDPLGENPAGEICIRGKCLFSGYY
KNPELTQEVMKDGWFHTGDIGEIQSNGVLKIIDRKKNLIKLSQGEYVALENLENIYGQNS
LVQDIWVYGDSFKSMLVAVIVPNQETVKRWAKELGFTKPFEELCSLSEFQEHIISELKST
AEKNKLRKFEYIKAVTVETKPFDVARDLVTATLKNRRNNLLKYYQVQVDEMYRKLASKKI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttcgcggcgaaggtggaagatggagtgagaggggaaaacgggaagccgtcg
gtaggtccggtgtaccggaatcttttgtcggaaaaaggttttcctccaatagattctgat
ataaccactgcttgggacattttcagtaaatcagtcaagaaattccctgacaacaagatg
cttggatggcgtcgaatcgtcgatgagaaggttggaccgtatatgtggaaaacttacaag
gaagcatacgaagaagttctacagattggctctgcattacgtgctcttggagctgagcct
gggtgtcgagtggggatctatggagttaattgtcctcagtggatcatagcaatggaggca
tgtgcggctcacactctaatctgtgtacctctatatgataccttgggttctggagcagtg
gattatatcgttgatcacgcggaaatcgattttgtattcgtccaagagaccaagattaaa
gggcttcttgagccagactgcaaatgtgctagacggctaaaagctatagtttccttcact
aatgtgagcgaagagcataacctcaaggcttcagaagtcggagtcaaaacgtactcttgg
ttcgattttctccaaatgggatgtgagaaaccggaagagactaccccgcctaagccgttt
aatatatgcaccataatgtacacgagcggcacgagtggtgaccctaaaggtgtggttttg
actcatgaagctgtggccacttacattgttggcatggatcttttcatggaccagttcgaa
gacaagatgacagatgaggatgtgtatctctccttcttgccgttggctcacattcttgac
cgtatgaatgaagaatacttcttccgcaaaggggcttccattggctattaccatggagat
ttgaatgtgttacgcgatgacattcaagaattgaaaccaacttatctagctggagttcca
agagtgtttgagagaatccacgagggtattcaaaaggctcttcaggaacttaacccgaga
aggagatttatcttcaatgctctctacaagcataagcttgcatggttaaatcgtggatac
tctcatagcaaagcttcacccatggctgacttcatagccttcagaaagattagagataaa
ttgggaggtcgaatccggttgcttgtatctggaggagcacctttgagcacagagattgaa
gagttcttgagagttacttgttgttgctttgtcgtccaaggctacggtctgacggagacg
cttggaggaacggctatgggcttcccggacgagatgtgtatgctagggacagtcggtata
ccggcggtttacaacgagatacggcttgaggaggtggctgaaatgggctacgacccactt
ggtgaaaatcctgcaggcgagatctgtataagaggaaaatgtttgttttctggttattac
aagaaccctgaacttactcaagaagtcatgaaagacggatggttccatacaggagatatt
ggtgagattcaatcaaatggagtacttaagataattgatcgtaagaagaatttgatcaaa
ctctctcaaggggagtacgttgctcttgagaacttggaaaacatctacggtcaaaactct
cttgtccaagatatatgggtttatggagacagcttcaaatcaatgcttgtcgcggtgatt
gttccaaaccaagaaaccgtaaaacggtgggctaaagaacttggttttactaaaccattc
gaagaactatgttctctctcggagtttcaagagcacatcatttcagaactgaagtccacg
gcagagaagaacaagctaagaaagtttgagtacatcaaagcagtgacggtggagacaaaa
cctttcgatgtagcgagagacttagtgactgcaacgctcaagaaccggaggaacaacctg
ctcaagtattatcaggtacaagtcgacgagatgtacagaaaattggcgtcaaagaaaatc
tga
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