Brassica napus (rape): 106392698
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Entry
106392698 CDS
T04128
Name
(RefSeq) transcription factor E2FA-like isoform X1
KO
K06620
transcription factor E2F3
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106392698
Transcription factors [BR:
bna03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
106392698
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
SKA1
DivIVA
APG6_N
Motif
Other DBs
NCBI-GeneID:
106392698
NCBI-ProteinID:
XP_048610584
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Position
C4:complement(9163426..9167572)
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AA seq
482 aa
AA seq
DB search
MSGGVRSSPGSSRQPPPPPQHPAASVPVVPPIRRHLAFASTKPPFHPSDNYHRFTPSHLA
NNLVNGCGGLVDREEDAVVLRSPSRKRKSTMDVVTTTTTSTSNGFTSSDGFTSSPCRTPV
SAKGDRVNIKSKAKGNQSIPQTPISNIGSPATLTPSGSCRYDSSLGLLTKKFVNLIKQAK
DGMLDLNKAAETLEVQKRRIYDITNVLEGIDLIEKPLKNRILWKGVDALRPGDVDADVSD
VQAEIENLSLEEQALDNQIRETEQRLRDLSENEKNQKWLFVTEEDIKSLPGFQNQTLIAV
KAPHGTTLEVPDPDEAVGHPQRRYRIILRSTMGPIDVYLVSEFEEKFEDTNGPAAPPPPP
PCLPIASCSGSTENHNIEALTVDNTGTAVEDQLSQTHANAQPGETSDLNYLEEQVGGMLK
ITPSEVENDDTDYWLLSNADISMTDIWKTDSGIDWDYGIADVSTPPPIIGDISPTAIDSI
PR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggcgtacgatcttcccctggttcttctcgccagccgccgccgccaccgcag
catccggcggcatctgtgcccgtggtgccaccaatacgtcgacacttagcgttcgcctca
acgaaaccgccgttccatccctcggataactaccaccgattcaccccttcgcacctcgct
aacaacctcgtcaatggctgtggaggactcgtagatcgggaggaggacgccgtcgttctt
agatctccttcacggaagagaaagtcgactatggatgtggttactactactaccacttct
actagtaatggattcacgagttctgatggtttcactagcagtccctgccgaactccggtt
tcagcaaaaggagacagagtcaacatcaagtcaaaagccaaaggaaaccagtccattccc
caaacacccatctcaaatattggttctcctgccacactaactccttctggaagttgccgt
tatgacagttctttaggtctccttacgaaaaagttcgtcaatcttatcaaacaagccaaa
gatggaatgctggacctgaacaaagctgcagagacattggaggtgcagaaacgtcgtata
tatgatattacaaacgttttggaggggattgatctcattgaaaagcctttgaagaaccga
atcctttggaagggagttgatgctttgaggcctggcgatgtggatgctgatgtttctgac
gtacaggcagaaattgaaaacctttccctcgaggaacaagcgctagataaccaaatcaga
gaaacggagcaaagattaagagatctgagcgaaaatgaaaaaaatcagaaatggcttttt
gtaactgaagaggacatcaagagtttacccggtttccagaaccagacactgatagccgtc
aaagctcctcatggcacaactttggaagtccctgatccagatgaggcggttggccaccct
caaaggagatacaggatcatcctcagaagtacaatgggtcctattgacgtataccttgtt
agtgaatttgaggagaagtttgaagacacaaatggccctgctgcaccaccaccaccacca
ccatgcttgcctattgcttcttgctcgggatctacagaaaaccataacatagaagcctta
actgttgataacacaggaactgccgttgaggatcagttgtctcaaacccatgcaaatgct
caacccggcgagacctctgatcttaactatttggaggagcaggtaggtggaatgcttaag
attactccctctgaagtcgaaaatgatgatacggattactggcttctctccaatgcggac
attagcatgacagatatttggaaaacagactctggtatcgattgggactatggaatagcc
gatgtgagtactccaccaccgataatcggtgacatatccccaaccgctattgactcaatc
ccgagatga
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