Brassica napus (rape): 106392723
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Entry
106392723 CDS
T04128
Name
(RefSeq) probable ubiquitin receptor RAD23a isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
bna
Brassica napus (rape)
Pathway
bna03420
Nucleotide excision repair
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106392723
09124 Replication and repair
03420 Nucleotide excision repair
106392723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bna03051
]
106392723
03400 DNA repair and recombination proteins [BR:
bna03400
]
106392723
Proteasome [BR:
bna03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106392723
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
106392723
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
TECR_N
UBA_3
HBS1_N
RNase_PH_C
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
106392723
NCBI-ProteinID:
XP_022558555
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Position
C5:8288853..8291594
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AA seq
363 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDSQSKGSYPCGQQLLIHNGKVLKDETTLV
ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTSTTTSSTTPAAPSTTQSIAANSTLAQEQP
AAQSDTDRQTPSTLVSGSSVEQRVQQIMEMGGGSWDEETVLRALRAAYYNTERAVDYLYS
GIPESEEAPLTNVSGVGSGAEQAAPPPASGGPNASPLDLFPQEAVSAAGAGDLGTLEFLR
SNDQFQQLRSMVNSNPQILQPMLLELGKQNPQLLRLIQENQAEFVQLLNEPYEGSDGEMD
VFDQPEQEMPHAVNVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEQLAANYLLENSAD
FED
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtcaagactctcaagggtagccattttgaaattagggttcagcccagc
gacacgataatggcggtgaagaagaatattgaggattcacagagcaaaggcagctatcca
tgtggacagcaactgttgattcacaatggaaaggttttgaaagatgaaactactttggtg
gagaacaaggtcaccgaggagggttttcttgttgtcatgcttagcaagagcaaaactgca
agttcagctggtccatcttctactcagcctacttccacgaccacatcttcaactacgcct
gcagctccatcgacaacccaatctatagctgcaaattccactcttgctcaagaacaaccg
gcggcacaaagtgacaccgatcgtcagacgccgtcaactttagttagtggcagtagtgtt
gagcaaagggttcagcaaataatggaaatgggaggaggcagctgggacgaagaaacagtt
cttcgtgcgcttcgtgctgcgtattacaacactgagagagcagtggattatctgtattct
ggaattcctgaaagtgaagaggctccactaactaacgtatcgggagtaggatctggtgca
gaacaggccgctcctcctcctgcctctggaggacctaatgcatctcctttggatttattt
ccccaggaagcagtgtctgctgctggtgcaggagatcttggaacacttgaattcctcaga
agcaatgatcagttccaacaattacgatccatggtcaattccaacccccagattctgcag
cctatgcttctagagctgggaaagcagaacccacaacttctgaggctaatccaagagaac
caagccgaatttgttcagttactcaacgagccctacgaaggatctgacggggaaatggat
gtttttgaccaacccgagcaagagatgccccatgcagtcaacgttactcctgcagagcaa
gaagcgattcaacggcttgaggcaatgggatttgatagagcattagtgatagaagccttc
cttgcgtgtgatcgtaacgagcaattggcggctaactatctgctagagaactcggcagat
tttgaagactga
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