Brassica napus (rape): 106393975
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Entry
106393975 CDS
T04128
Name
(RefSeq) agamous-like MADS-box protein AGL16
KO
K09264
MADS-box transcription factor, plant
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106393975
Transcription factors [BR:
bna03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
106393975
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
Pox_A11
KH_DTX3L
SOGA
Motif
Other DBs
NCBI-GeneID:
106393975
NCBI-ProteinID:
XP_013690063
UniProt:
A0A078IH39
A0A816N857
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Position
C7:complement(53188207..53191784)
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AA seq
240 aa
AA seq
DB search
MGRGKIAIKRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS
SMKSVIERYRDAKCDTNSEMNPASEIKFWQNEAAILKRQLHNLQENHRQMMGEELSGLSV
EDLQKLENQLEMSLGDVRMKKEQMLVEEIKELNREGNLVHQENLELHKKVNVMHQQNMEL
HKKVSEVESVKSADKTSLLTNGLDMGGNSSEHVHLQLSQPQQHDETRSKAIQLSYFSFIA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggggaaagatcgcgattaagaggatcgataactcgacgagtcgtcaggtgact
ttctccaagagaaggaacggcttgttgaagaaagccaaggagcttgcgattctctgcgat
gctgaggttggtgttatcatcttctccagcactggcaggctctacgatttctccagctcc
agcatgaagtcggtaatagagagatacagagatgccaaatgtgacaccaattcggaaatg
aacccagcttcagaaatcaagttttggcaaaatgaggctgcgattctgaagcgacagcta
cataacttgcaagaaaaccaccggcaaatgatgggtgaagagctctctggactaagtgtg
gaagatcttcagaaactggagaatcagcttgagatgagccttggcgacgtacgaatgaaa
aaggagcaaatgttagtcgaagaaataaaagaactcaaccgagagggtaatctcgtgcac
caagagaatttagagctccacaagaaagtaaacgtaatgcaccagcagaacatggagtta
cataagaaggtttcagaggttgagagtgtgaaaagcgcagacaaaacttctcttctcaca
aatggtctagacatgggaggtaactcgagcgaacatgtccatcttcagctcagccaaccc
cagcagcatgatgagacacgttccaaagctatccaactaagctatttttctttcattgcg
taa
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