Brassica napus (rape): 106394103
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Entry
106394103 CDS
T04128
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106394103
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
106394103
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
106394103
NCBI-ProteinID:
XP_048634601
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Position
A4:19887386..19890214
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AA seq
404 aa
AA seq
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MAWIASAFKALCLSFLFVSVACRSTNGSKVFNVRRYGANPDGKTDNVNTFTSIWKSACAR
SGSSKIYVPNGTFYLGGAVVFEGPCINQIEFIIDGTLLAPSNPGDIKNKTWINFRYINNL
LISGAGTLDGQGKESWKLNDCSKNPSCPILAMNMGFAFVNNSRINGITSLNSKMGHFDFF
SVHQFNITGVTIKAPGDSPNTDGLKFGFCSNIHISDTHIGTGDDCIAILSGVTDMDISNV
KCGPGHGISVGSLGKGKDDKDVNGLTVRDTVFNGTSDGIRIKTWESSISQIVVSHLVYEN
IQMINVGNPINIDQTYCPYPPCKKKGESHVQIQDLKLTNIYGTSKNKVAVKLKCSKSFPC
KNVELVDINLENKGAKGPSTAVCENVHGSALGKMVPEHCLNGPW
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattgcttctgcgtttaaggctttgtgtttgtctttcttgttcgtcagcgtt
gcatgtcgttcgaccaacggatcgaaggttttcaatgtccgacgctatggtgccaatccc
gacggcaaaactgataacgtcaacacgttcacaagtatatggaaaagcgcatgcgcaagg
agtggaagtagtaaaatctacgtaccaaatggaacattctatctcggtggtgcggtggtg
ttcgaggggccatgcataaatcagattgaattcattatagatggaactttattggctcct
tcaaaccccggagacattaaaaataaaacgtggatcaacttcaggtacattaacaatctc
ctaatctctggtgctggtacactagacggccaagggaaagagtcatggaaactcaatgac
tgctccaaaaaccccagctgtcctatactagctatgaacatgggatttgcatttgtgaat
aactcgagaatcaacgggataacatcactcaacagcaaaatgggacacttcgacttcttc
tccgtccaccagttcaacattaccggagtcactataaaagctcctggcgacagccctaac
accgacgggcttaagttcgggttctgtagtaacattcacatctccgacacacacatcgga
acgggagacgactgtatcgccattctttccggagttactgacatggatatctctaatgtc
aagtgtggtcccggacatgggatcagtgttggaagcttagggaagggcaaagacgataag
gatgttaatggcctaaccgtaagagacacggtttttaacggcacaagtgatggtattcgg
atcaagacttgggaatcttcaatttctcagatcgttgtttctcacctcgtgtacgagaat
attcagatgattaatgttggaaacccgatcaacatcgatcagacgtattgtccttatcca
ccctgtaaaaagaagggagagtcccacgtacagatccaagaccttaagttaacgaacata
tatggaacttcgaagaacaaagtggcggtgaaactaaaatgtagcaagagctttccgtgc
aagaacgttgagctagttgacataaacctagagaacaagggagccaagggtccttccact
gcggtatgtgagaatgttcacggttctgcacttggcaagatggttcctgagcattgtctg
aacggtccatggtaa
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