Brassica napus (rape): 106394108
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Entry
106394108 CDS
T04128
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
bna
Brassica napus (rape)
Pathway
bna04016
MAPK signaling pathway - plant
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
106394108
04075 Plant hormone signal transduction
106394108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106394108
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106394108
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
106394108
NCBI-ProteinID:
XP_013690169
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All DBs
Position
C4:complement(50984587..50987630)
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AA seq
623 aa
AA seq
DB search
MSQIYSFAGESEFYRRGSNPKEANIFLSLGSLVDCYYPPCKRSRVVAAPSLFSAFEEEKP
VSIDVLPDECLFEIFRRLPGPQERTACAFVSKHWLTLVTSIRQSELDVVDHKTEDDSEGC
LSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSVRGSDKVSDLGLRSIGRSCPSLGSLSLC
SLSAVTDIGLLEIAEGCPQLEKLDLSRCPAITDKGLVAIAKSCPNLSELTLEACSNIGDE
GLQAVARSCSKLKSVSIKNCPLVRDQGIAALLSNTTCSLTKLKLQMVNVTDVSLAVVGHY
GLSVTELVLAGLSHVTEKGFWVMGNGIGLQKLNSLTITACQGVTDTGLESVGKGCPNMKK
ALISKSPLLSDNGLVSFAKGSLSLESIQLEECHRVTQFGFFGSLLNCGAKLKAFSMVNCL
GIRDLATGLPASSHRSGLRSLSVRNCPGFGDANLAALGKLCPQLEDIELCGLKGVTESGF
LHLLQNSLVKVNFSVCSGLTDRVVSAISARNGLTLEVLNMDGCSKISDASLVSIAANCQI
LSDLDLSKCSVSDFGIQALASSEKLKLQILSMAGCSRVTDKSLPSIVKLGSTLLGLNLQQ
CRSVSCSTVDFLVERLYKCDILS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatctatagctttgctggtgaaagtgagttttaccgtcgtggctcaaatcca
aaggaagctaacattttcctgtccctcggtagcctcgttgattgctattaccctccttgc
aagaggtctcgcgtcgtcgctgcgccttcgctcttcagtgcgttcgaggaggagaagcca
gtctctatcgacgtccttcctgatgagtgcctctttgagatcttcaggcgtttacctggc
ccacaagagaggaccgcttgcgctttcgtctccaaacactggcttactcttgtaaccagc
atccgacaaagcgagcttgatgttgttgaccacaaaaccgaagatgactctgaaggatgc
ttatctaggagcttagatgggaagaaggctactgatgttagactagctgccatcgccgtt
ggaactgctggccgtggtggactcgggaaactctctgttcgcggaagcgacaaggtttcg
gatcttggtcttaggtcgattggtcggagctgcccttctctcggctctctttccctgtgt
agcctttctgctgttactgatattggtctcttggagatcgccgagggttgccctcagctt
gagaagcttgacctgagccgttgccctgcaatcaccgacaagggtttggtggcgattgcc
aagagctgccctaacttgagcgagcttacactggaggcttgttcgaacatcggagatgaa
ggcctgcaagctgttgcacgatcttgctccaagcttaagtcggtgtctatcaagaactgt
cctctcgtcagggatcaaggaatcgccgcgctattgtctaacaccacgtgttccctgacg
aagcttaagcttcagatggttaatgtcactgatgtgtctcttgctgtcgtgggtcattac
ggcttgtcggtcactgaacttgtgctcgctggtctgtctcacgtgaccgagaagggattc
tgggtgatgggaaatggtatcggactgcaaaagttgaactctctaaccatcacagcctgc
cagggagtgaccgacacggggcttgaatctgtggggaagggatgtccgaacatgaaaaag
gcgttgatcagtaaatccccgttgttatctgacaacggtttggtctcttttgcgaagggt
tctttgtcattggagagtattcagcttgaagagtgccacagggtcacccagtttgggttt
tttggttctcttttgaactgtggtgcaaagctgaaggctttctcaatggtgaactgtttg
gggattagagatctcgccacggggttacctgcttcatctcatcgcagtggtctacgctct
ctgtctgttcgcaactgccctggctttggagatgcaaaccttgctgctcttgggaagcta
tgccctcagctcgaagatattgagctgtgtgggctcaagggggtaacagagtctggcttt
ctacatctacttcagaactctcttgtgaaggtgaacttcagtgtctgttccggtttgaca
gacagagtcgtctctgccatctctgctcgcaacgggttgactctcgaagtcttgaacatg
gatggatgtagcaagatctctgacgccagtctagtctccattgcagcaaactgccagatt
ctaagtgatttggatctttcgaaatgctcggtctctgattttgggattcaagcattggct
tcctctgaaaaactcaaacttcagatcctatccatggcaggttgctctagggtcactgac
aagagcttaccatccatcgttaagttgggttcgactttactggggttaaatctccaacag
tgtcgatcagtgtcctgttccactgtcgacttcttagtcgagaggctttacaaatgtgac
atcctttcctga
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