Brassica napus (rape): 106394343
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Entry
106394343 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: fumarate hydratase 1, mitochondrial
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna00020
Citrate cycle (TCA cycle)
bna00620
Pyruvate metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
Module
bna_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bna_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
106394343
00620 Pyruvate metabolism
106394343
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
106394343
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
106394343
NCBI-ProteinID:
XP_048634822
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Position
A4:22006338..22013762
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AA seq
527 aa
AA seq
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MRAGVVVPALGGISHVAIQFPTYETCLTKKGLSLISPSVISKLSTTSVPTMAINVASRRL
SSGTALRRAMRSYSTFREERDTFGPIQVPSDKXRGSLSLQNFEIGGERERMPEPIVRAFG
VLKKCAAKVNMEYGLDPTIGKAIMQAAQEVALXDHFPLVVWQTGSGTQSNMNANEVIANR
AAEILGGDKCVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIPSLKTLHSTLHSKSFQ
FKDIVKIGRTHTQDATPLTLGQEFGGYATQVKYGLNRVTCTLPRLYQLAQGGTAVGTGLN
TKKGFDVKIAAAVAEETNLPFVTAENKFEALAAHDACVETSGSLNTIATSLMKIANDIRF
LGSGPRCGLGELVLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFE
LNVFKPVIASALLHSIRLVADASASFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIG
YDNAAAVAKKAHKEGSTLKEAALKLGVLTAEEFDTLVVPEKMIGPSD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgggtgtagttgtgcctgcactaggtggtattagtcacgttgccattcagttt
cctacgtatgagacctgcttgaccaaaaaagggctatctttaatctctccgtctgtcata
tcgaaactctccaccacctccgtccccacaatggcgattaacgtcgcttcacggcgtctc
tccagcggaacagcgctgcggcgtgctatgagatcttattcaacgtttagggaggagaga
gacaccttcggcccgatccaagttccttccgataagnttcggggatctctctctcttcag
aacttcgagatcggtggtgagcgcgagcgtatgcccgagcctatcgtccgcgcttttggc
gtcttgaagaagtgcgccgccaaggttaacatggagtatggtcttgatccaacaattggg
aaagccattatgcaagctgctcaggaagttgctctatgagatcatttcccccttgttgtt
tggcaaactggtagtggcactcagagtaacatgaatgctaatgaggtcattgctaacaga
gcagctgagattcttggtggtgataaatgtgtccaccctaatgaccatgtcaaccgatct
caatcctctaacgacactttccctactgtcatgcacattgcagctgcaactgagattaat
tcaaggctcatccctagtttgaaaactttgcattccactctccactctaagtccttccag
ttcaaagatattgtgaaaattggaagaactcacactcaagatgctactcctttgacgcta
ggacaagaatttggtggctacgctactcaagttaagtatgggcttaatagggtcacatgc
actctaccccgcctctatcagcttgcacaaggtggaactgctgttggaacaggattaaac
accaagaaagggtttgacgtaaagatagctgctgcagtagccgaagaaacaaacttgccg
tttgtcactgcggaaaacaagttcgaagctctggctgcacacgatgcttgtgttgaaacc
agtgggtcacttaacacaatcgccacatccttgatgaagatcgccaatgatatacgtttt
cttggaagtggcccaagatgtggtcttggtgagcttgttctgcctgaaaacgagccagga
agcagcatcatgcctgggaaggttaatcctacacaatgtgaggccttgactatggtttgt
gctcaggttatgggcaatcatgtagctgtgacagttggtgggtcaaatggtcatttcgaa
ttgaatgtatttaagccagtgatcgcaagcgctcttttgcattccattagattggtagca
gatgcctcagcttcgtttgagaaaaactgtgtgaggggaattgaggccaacagagaacgg
atctcaaagctattgcatgagtcccttatgcttgtgacatcattgaatccgaaaatcgga
tatgacaatgctgcagcagttgccaagaaagctcacaaagaaggatctacattgaaggaa
gcggctctgaagttgggtgttctgacggcagaagagtttgatacacttgttgttcccgag
aagatgatcggtccctctgattga
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