Brassica napus (rape): 106394875
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Entry
106394875 CDS
T04128
Name
(RefSeq) pectinesterase 5-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106394875
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106394875
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Paralog
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Motif
Pfam:
Pectinesterase
PMEI
CCPG1_C
Motif
Other DBs
NCBI-GeneID:
106394875
NCBI-ProteinID:
XP_013690880
UniProt:
A0A078HKE0
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Position
C4:858959..861328
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AA seq
589 aa
AA seq
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MIGKVVVSVASVLLLVGVAIGVVAIVNKSGNTNLSPQMKAVQGICQATADKASCVKTLEP
VKSDDPNKLIKAFMLATQDALTKSSNFTDKTEGNMGSSISPNNKAVLDYCRKVFMYALED
LGTILEEMGEDLNQIGNKFDQLKQWLTGVYNYQTDCLDDIQEDDLRKTIAEGISSSKILT
GNAIDIFHTVVSAMAKIDAKVDDFKNMTSGIFTPSAPANKEAAPVVDTPVADPDGPSRRL
LEDLGVPTWVSGADRKLMANAGRGRRGGGGAPRIRATYVVAKDGSGQFKSIQQAVNACPD
KNAGRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVITYNRSVRLSSGTTTSTSGTV
QVESEGFMAKWIGFKNTAGPNGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRN
CVVSGTVDFIFGKSATVIQNSLIVIRKGNKGQYNTVTADGNEKGLSMKIGIVIQNCRIVP
DKKLAPERLTVESYLGRPWKQYSTTVVINTEIGDVIRPEGWRLWDGESFHKTCRYVEYNN
RGPGANTNRRVNWAKMARSAGEINQFTVANWLAPVNWIQEANVPVTLGL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgattggaaaagttgttgtctccgtggcctccgtccttctattggtcggagtagccatt
ggagtcgttgccatcgttaataaaagcggaaacactaatttgtctccacagatgaaagct
gttcaaggcatttgccaagccactgctgacaaagcctcatgtgtcaaaactctcgaaccg
gttaagagcgatgacccaaacaaattgatcaaggccttcatgctcgctacacaagatgca
ttaaccaaatcatcaaacttcaccgataaaaccgaaggcaacatgggttcgagcatctcc
ccaaacaacaaagccgttcttgattactgcaggaaagttttcatgtacgcgcttgaggat
ctcggtaccattcttgaggaaatgggtgaagatcttaaccagatcggtaacaaattcgac
cagcttaaacagtggttaaccggtgtttacaactaccaaaccgattgtcttgacgatatt
caagaagatgatttgagaaagactattgctgaaggcatttctagctccaagattcttact
ggtaatgccatcgacatcttccacacagttgttagcgccatggccaagattgacgctaaa
gtcgatgatttcaagaacatgacaagtggaatcttcactccttcagctccggccaacaaa
gaagccgctcctgtcgttgacactcctgtggccgaccctgacggtccttctcgtcgtctt
cttgaagaccttggagtcccaacatgggtttcaggtgcagacaggaagctcatggctaac
gctggacgtggccgaaggggaggcggtggagctcctagaatcagagcaacctatgtggtg
gctaaggatggaagcggacaatttaagtcaattcaacaagctgttaacgcttgtcccgac
aaaaacgctggaagatgcatcatccacatcaaggctggtatctacagagagcaagttatc
atccctaagaagaagaacaacatcttcatgttcggagatggtgcaagaaaaaccgttatt
acttacaacagaagtgttcgtctcagttctggaaccaccacttctactagtggcacagtc
caggttgaatctgaaggattcatggcgaaatggatcggattcaagaacacagccggtcca
aatggtcaccaagctgttgctatcagagtcaacggcgaccgtgccgtgatcttcaactgc
agattcgacggttaccaagacacactatacgtcaacaacggtcgtcaattctacagaaac
tgcgtcgtttcaggaacagtcgacttcatcttcggcaaatcagctaccgttatccaaaac
tcactcatcgtcatccgcaaaggaaacaagggacaatacaacaccgtcacagccgacggt
aacgaaaagggtctatccatgaaaatcggtatcgtcatccaaaactgccgcatcgttccc
gacaagaagctagctcccgagaggctgaccgttgagtcatacttgggaaggccgtggaag
cagtactcgaccaccgtggtgattaacaccgagatcggagatgtgattagaccagaaggt
tggagactgtgggatggagagagcttccacaagacatgtaggtacgttgagtacaacaac
cgtggaccaggagctaacactaacaggagagttaactgggctaagatggctaggtctgct
ggtgagattaatcagttcactgtggctaactggttagctccggttaactggatccaagaa
gctaacgtgcctgtcacgcttggattataa
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