Brassica napus (rape): 106395932
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Entry
106395932 CDS
T04128
Name
(RefSeq) ABC transporter E family member 1-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106395932
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
106395932
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
Fer4
AAA_22
Fer4_6
DUF5906
AAA_23
RsgA_GTPase
AAA_15
AAA_29
AAA
NACHT
Rad17
nSTAND3
Fer4_21
VapE-like_dom
TsaE
LdpA_Fe-S-bd
Fer4_2
AAA_16
SRP54
AAA_28
AAA_30
Fer4_9
Fer4_10
Fer4_4
Fer4_16
ORC-CDC6-like
ScmC
Fer4_7
Fer4_17
DLIC
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
106395932
NCBI-ProteinID:
XP_013691699
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All DBs
Position
A3:complement(17396873..17400410)
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AA seq
603 aa
AA seq
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MSDRLTRIAIVNSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPASKTAFLSEELCIGCGI
CVKKCPFEAIQIINLPKDLETDTIHRYNSNGFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
QILAGKIKPNFGRYNNPPDWHEILAHFRGSELQSYFIRLVEEKLKTAMKPQHVDAIKKVA
KGTLGTVLEKLDEKGMMAEICDAMDLNHLLDREATQVSGGELQRFAIAAVCLKKADIYVF
DEPSNFLDVRQRLKAADVIRSLLKHDNYVIVVEHDLSVLDYLSDFVCCLYGKPTAYGVVT
LPFSVREGINVFLAGFVPTENLRFRDESLTFKVSDTPQGSDGEVKSYARYKYPNMSKKLG
DFKLDVMEGEFTDSQIIVMLGENGTGKTTFIRMLAGAFPSEEGVESEMPEFNVSYKPQGN
DSKRECTVRQLLHDRIRYAYTHPQFMSDVMKPLRIEELLDQAVNKLSGGERQRVAITLCL
GKPADIYLLDEPSAHLDSEQRITASKVIKRFILHAKKTAFVVEHDFMMATYLADKVIVYE
GQPGVKCTAHSPQSLSSGMNLFLSHLNITFRRDPTNFRPRINKLESTKDREQKLAGSYYF
LDD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcgattaacgaggattgctatcgtgaatagcgatcggtgcaagcccaagaaa
tgccgccaagagtgcaagaagagctgtcctgtagtcaagacagggaaactttgtatcgag
gtgactcctgcttccaagactgctttcttgtcagaggagctgtgcataggatgtggtatc
tgcgttaagaaatgcccttttgaagctattcagattatcaatctcccaaaggacttggag
acagatacaatccaccgctataactcaaatggttttaaactacacaggcttccagtgcca
aggcctgggcaagtcctaggtttggttggaacaaatggtattggtaaatctactgccctc
caaatcttggctggaaaaatcaaaccaaactttggcagatacaataatcctcctgactgg
catgaaattttggcacacttccgcggttcagaacttcaaagctatttcatccgccttgta
gaagagaaactaaagactgctatgaagccacaacatgttgatgcaataaaaaaagttgct
aaaggtacgcttgggacggtccttgagaagctggacgaaaaaggaatgatggcagagatc
tgtgacgctatggacttgaaccacctcttggaccgtgaagcaacgcaagtgtctggtgga
gagctacaacgttttgctattgctgcagtgtgcctcaagaaggcagatatatatgtcttt
gatgaaccttctaacttcttagatgtgaggcaaagactcaaagctgctgacgtcatacgc
tccctcctcaaacatgacaactacgtgattgtggtggagcatgacctcagtgtacttgac
tacttgtccgacttcgtttgttgtttgtatggaaagccgacagcttatggtgtcgtgact
ctccccttctctgtccgagaaggaatcaatgtgttcttagccggttttgtccccactgaa
aacttgcgttttagagatgagtctctgaccttcaaggtttctgatacaccacaagggagt
gatggagaagtgaagtcatacgcaagatacaagtaccctaacatgagtaagaagcttgga
gacttcaagctggatgtaatggaaggagagttcacagactctcagattattgtgatgctt
ggggagaacggtactgggaaaacaacattcatcaggatgctggcaggtgcgttcccaagt
gaagaaggtgtagagtcagagatgccagagtttaacgtgtcctacaagcctcaaggaaac
gattccaagcgggagtgtacagtgagacagctcctacatgataggatacgctatgcatac
acgcatcctcagtttatgtcggatgtaatgaaaccgcttcggattgaggagctgttggat
caagcggtgaacaaactctccggtggagagaggcagagggttgctataactttgtgcctt
ggtaagcctgcggatatctatctgcttgatgagccaagtgcacatctagactctgagcag
aggatcacagcttctaaagtcataaagcggttcatcttacacgcaaagaagacagcgttt
gttgttgagcatgactttatgatggcgacctatcttgcggataaagtcattgtgtatgaa
ggacaacctggtgtcaagtgtactgctcattctccacagtcgctctctagtggaatgaac
cttttcttatcgcacctgaacatcacattcagacgagatccaactaacttcaggccaagg
atcaacaagttagagtccaccaaggacagagagcaaaagcttgcaggatcatactacttc
ttagatgattga
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