Brassica napus (rape): 106396025
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Entry
106396025 CDS
T04128
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5 isoform X1
KO
K25871
zinc finger protein IDD14/15/16
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106396025
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106396025
BRITE hierarchy
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-MYST
zf-C2H2_4
DUF555
Motif
Other DBs
NCBI-GeneID:
106396025
NCBI-ProteinID:
XP_013691779
UniProt:
A0A078F4J6
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Position
A2:23493534..23496650
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AA seq
438 aa
AA seq
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MMRTDQDTVVILDAASNKNTSNTCCVVSSSSSDPFLSSSENGVATTNTSNQKRKRRPAGT
PDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKK
RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKT
CGTRGHSCDCGRVFSRVESFIEHQDSCSIRKVHHEPPPPPQATVNVPACSSRTASTASTP
STETNYAGAVATPLPLEGRPIPIRNSSNDVNLELQLLPLTPNQNRNQENQQHKVKEPSHH
RNHHDTTNLNLSIAPTAPSLSHQYNNFDRIKEIMASEQIMKLAMKEKAYAEEAKREAKRQ
REIAENEFVNAKKIRQQAQAELERAKLLKEQSMKKISSTIMQVTCQTCKGQFQAVASADE
TSLVVSYMSSANTDGEAS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaacagatcaagacacagtagtgatattggatgctgcttccaacaagaacact
agtaacacatgttgtgtggtttcctcttcttcctctgatcctttcctctcttcttctgaa
aatggggtcgctaccacaaacacatccaatcagaagaggaaaagaagacctgcaggtaca
ccagatccagatgcagaagttgtgtctttatcaccaagaactcttcttgaatcagacaga
tacatatgtgagatctgtaaccaagggtttcaaagagatcaaaatctccagatgcatcga
agacgtcacaaggttccatggaagcttctgaaaagagacaacaatatagaggtgaagaaa
cgagtgtatgtttgccctgaacccacttgtcttcaccacgatccttgtcatgctcttgga
gatcttgtcggaataaaaaaacatttcagaagaaaacacagtaaccataagcaatgggtt
tgtgagagatgctctaaaggttatgctgttcaatcagattacaaagctcatctcaaaact
tgtggcactaggggacattcttgtgactgtggtcgcgtcttctccagggtggagagtttt
attgagcatcaagatagctgctccattcgaaaagttcaccatgaaccgccgccaccgcca
caagctacggtgaatgtcccggcttgctcctctagaactgcctcaaccgcaagcactcca
tctacggaaacgaattacgctggtgcggttgctactcctttacctctagaagggcgtcca
attcctataagaaactcatcaaacgatgtcaatctcgaactccagcttcttccattaacg
ccaaatcaaaaccgtaatcaagaaaaccaacaacacaaagttaaagaaccatctcatcat
cgtaatcatcatgatactacaaacttaaacctctccattgcaccaactgcaccatcatta
tctcatcagtacaacaactttgatcgtataaaagaaataatggcgagtgaacagataatg
aagttagcgatgaaggagaaagcttacgcagaggaagctaaaagagaagcgaagaggcaa
cgagagatagcggaaaacgaatttgttaatgctaagaagataaggcaacaagcacaagct
gagcttgagagagctaagcttttaaaggaacaatctatgaagaagataagctcgacgatt
atgcaagttacttgtcaaacatgtaaaggacagtttcaagcggtggcttcggcggatgag
acatctcttgtggtgagttacatgtcgtcagcgaatactgacggagaggcatcctaa
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