Brassica napus (rape): 106396070
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Entry
106396070 CDS
T04128
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106396070
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106396070
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106396070
NCBI-ProteinID:
XP_013691822
UniProt:
A0A816X7Z4
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Position
A2:23579105..23584818
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AA seq
589 aa
AA seq
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MAASSSSNASFFGVREEDQTHLLPPNPSAAVAPPPHHQPPQSQQPLEAPPQKKKRNQPRT
PNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRK
VYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCG
TKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYGQNTNSNNNSS
SMMLGLSHTGPPQNLDHHSGDVLRLGSGEGVGGGAASRSSSDLIAANSSGYFMQDQNLSF
HDQQQGFLAASNNIKPSPMNFQQSLMQFSHDSHNSPSSNLFNLSFLSGNNGVASATSNHN
AAAVSSGNLMISNHFDGENAIGGGGGGEGSTGLFPNNMINSTDRTSSGAVPSLFSSSMQN
PISTPQMSATALLQKAAQMGSTSSNNNNNNNNGSSNNNNNNASSILRNFGSGMYGENESN
LYDLMNSFSNPDPTGNNANGVNSPFGSYRGVNKGLNADKQSLTRDFLGVGQIVRSMSGSG
GVQQQQQQHGNSRERVGSSSDSVDRNSNTFNPGGGPATSPPYGIHHASF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatcctctaatgcttccttctttggagttcgagaagaagatcaaact
caccttcttcctccgaatccctccgcggccgtcgctcctcctcctcaccaccagccaccg
cagtctcagcaacctcttgaagctccaccgcagaaaaagaagagaaatcaaccaagaact
ccaaattccgatgcagaagtgatcgctttatctccaaagacactaatggctacaaataga
ttcatatgcgaagtatgcaacaaaggttttcagagagaacagaatctacaacttcatcga
agaggacacaatctcccatggaaacttaagcagaagtcgaccaaagaggtgaagaggaaa
gtgtatctttgtccggagcccacgtgcgtccaccatgatccgtcacgtgctctcggagac
ctcaccggaatcaagaaacattattaccgtaaacacggtgaaaagaagtggaaatgcgag
aaatgttctaagcgttacgctgttcaatcggattggaaagctcactccaagacttgtggt
accaaagaatatcgttgcgactgtggtacactcttctcccggcgagatagtttcattaca
catagagccttctgtgacgcgttggctcaagagagtgcgagacacccaacttctttgact
tctttaccaagtcatcacttcccgtacggacaaaacaccaactccaacaacaacagttca
agcatgatgcttggtttgtcccacacggggcccccacagaatcttgatcatcactctggc
gacgttctccgacttggaagcggcgaaggagtaggtggaggagccgcctcacgctcttca
tctgatctcattgctgcaaattcttcaggttacttcatgcaagaccaaaaccttagcttt
catgatcaacaacaaggatttttggctgcaagcaataacatcaagccatcaccaatgaat
tttcaacagagtctgatgcagttctcgcatgatagccataactctccttcctccaatctc
ttcaatctcagtttcctctctggaaacaacggagttgcttctgctacaagcaaccataat
gctgctgctgtttcttccggtaatcttatgatctcgaaccattttgatggcgaaaatgct
attggaggcggaggaggaggggaaggaagcacgggtctctttcctaacaatatgattaac
tcgacggacagaacaagctcaggagcagtgccttcactctttagctcatcaatgcaaaat
cccatatcaacacctcaaatgtcagccactgctcttcttcaaaaagctgctcaaatgggt
tcaacctcaagcaacaacaacaacaacaacaacaacggaagcagcaacaataataataac
aatgcctcatccattctaagaaactttgggagtggaatgtacggagaaaacgagagtaat
ctctacgatttgatgaactctttctctaaccccgatccaacgggaaacaacgctaatgga
gtaaattctccgtttggttcgtacagaggagtgaacaagggattaaacgctgataaacaa
agcttgactagagactttcttggagttggacagatcgtaagaagcatgagtggaagcgga
ggggttcaacaacagcaacaacaacatgggaatagtagagaaagagttggctcttcgtcg
gattctgtcgatagaaacagcaacacttttaatcctggtggtggtccggcaacttcacca
ccgtatggaatccatcatgctagtttctag
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