Brassica napus (rape): 106396295
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Entry
106396295 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106396295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106396295
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106396295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG17_like
Motif
Other DBs
NCBI-GeneID:
106396295
NCBI-ProteinID:
XP_013692099
UniProt:
A0A816J5V0
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Position
C4:4724831..4728222
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AA seq
719 aa
AA seq
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MSGFSFGQSNTGGGSLFGSSSAASSSSASSTSSPLAFSFNQSTGFGFGSTAQAAPASSTT
PSFGFGATASAPASSTTPSFGFGATASAPAASTTPSFGFGATSSAPASSTTPPFGFGATA
STVTAPASSTTPSFGFGAPASTGFGFGSSAASSSGSAPSLFGSSTNASAASPGSSPFGFV
TSSASQPGASSSSATVSAPSPFGAAPASGSAPLFGSSSSLFSAPSSAASSSSPLFATSSS
VPASTASLFGAQSSATASTPSMFGAAAPFSSAPGSTPSMFGSSSASGTSQSIFGSAASSA
SGSSPSIFGATGSTQAIFGSSSLSGAAAASSPSQFGFSTNNTSSTITNPLASPFSASTGL
SFSKSTGSSTPAISPSAPSQTTSSSSSFSFATPASSAPASTTSPALFSIATTTTTTSSST
PAATSAPSSSAAASTTTFPSFGVGSSAANSTPATSSAPAFGFTSSTSAAATTAFAVPQTT
PTTATTTQTSLVVASTSGTSTSVAAPVAAAPKLPSEITGKTVEEIIKEWNTELEERTGRF
RKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQLELIDTHQQEVDKALLSME
EEAERIYNDERKSLLDDEAASTRDAMYEQSELVERELEHMTEQIRSIIQSVNANQGGELE
AVDGMNALDVVVRILNNQLSSLMWIDEKAEEFSSRIQKIASQGSGADRELMMAPKHWMS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggttttcgtttggtcaatcgaacaccggtggaggatccttgttcggatcttcc
tccgccgcgagctcctcgtctgcttcatccacctcatctccgttagctttctccttcaat
cagtccaccggatttggattcggttccaccgcacaggctgctcctgcttcctctacaact
ccatcgttcggattcggagccaccgcatcggctcctgcttcctccacaactccgtcgttt
ggatttggagccaccgcttcggctcctgctgcttctacaactccatcgttcggatttgga
gccacctcatcggctcctgcttcctccacaactccgccgtttggatttggagccaccgca
tctaccgtaacggctcctgcttcctccacgactccatcgtttggattcggagcacccgca
tccaccggattcgggttcggatcctctgctgcgtcttcatctggttctgctccctcgttg
tttggatcttctaccaatgcttctgcggcttctcctggttcttctcctttcggattcgta
acttcatctgcttctcagcctggcgcttcttcttcttccgcgactgtttcagcaccatct
cctttcggagcagcgcctgccagtggttcagcgccactctttggatcttcctcatcctta
ttctccgctccttcatctgcagccagctcgagttctcctctcttcgccacatcctcatct
gtacctgcctcaaccgcttctctattcggcgcacaatcttcagccaccgcctccacacct
tcaatgttcggcgctgcggctccgttctcatcagcccctggctccacaccttcaatgttt
ggatcctcatcagcctctggcacctcacagtcaatctttggctcggccgcgtcatcagcc
tctggctcctcaccgtcaatctttggagccaccggttcgactcaggccatcttcggatcg
tcttccttgtcaggcgcagcagcagcttcttcaccatcccagtttggattttccaccaac
aacacttcctccactataaccaatcccttggcttctccgttctctgcttctaccggactc
tctttctcgaaaagcacaggaagttccacccctgctatctccccttccgctccttcacaa
acgacttcgtcatcttcctcattctcatttgctacacccgcaagctcagctcctgcatcc
accacatccccagcactgttctctatagcaaccaccaccaccaccacgtcctcttcgact
cctgctgccactagtgcaccatcttcctcagctgcagcctctacaacgacctttccttct
tttggtgtgggttcatctgcagccaacagcactccggctacttcctctgctccagcattt
gggtttaccagctccacttctgccgctgcaactactgcttttgctgtaccccaaacaaca
ccaactactgctactacaacgcagacatctcttgttgtggcttccactagtgggacaagc
acatctgttgcagctccagtggctgctgctcccaagctaccatctgaaataactggcaaa
actgttgaggagattatcaaggaatggaatactgagctggaggagcgtacagggagattc
aggaaacaggcaaatgcgatagctgaatgggataagcggatcctgcagaaccgtgatgtt
cttttgaggcttgagattgaagttgcaaaagtggttgaaacacagtctagtttggaaaga
cagctggaattaatcgacactcatcaacaagaggttgacaaagctttgctaagcatggag
gaagaggctgagcgtatatataatgacgagcgcaaatcgcttcttgacgatgaagcagca
tcaacaagagatgcaatgtatgaacagtctgagcttgtagaaagagaactggagcatatg
actgaacaaatcagatcgataatacaatccgtaaatgcaaaccagggtggagaactagaa
gcagttgatgggatgaatgcattggacgtagtagtcaggatcttgaacaatcaactcagt
tccttgatgtggattgatgagaaagcagaggaattctcatctcggattcaaaagatcgca
tctcaaggctctggtgcagaccgtgaactgatgatggctccaaagcactggatgtcttga
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