Brassica napus (rape): 106396297
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Entry
106396297 CDS
T04128
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106396297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106396297
03036 Chromosome and associated proteins [BR:
bna03036
]
106396297
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106396297
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106396297
PBAF complex
106396297
GBAF(ncBAF) complex
106396297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
106396297
NCBI-ProteinID:
XP_013692101
LinkDB
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Position
A5:complement(271290..273741)
Genome browser
AA seq
514 aa
AA seq
DB search
MEVTTDRSSSKDAELELELELYTIPAQSSWFVWDDIHEIERREFTEFFSESSITRTPKVY
KEYRDFIINKYREDTSRRLTFTSIRKYLIGDVNLLRKVFLFLEKWGLINFLQKSDDVVVE
ESEAKIEQGTTPAGIRVTSTPNSTRPVIAPPLVEERAEPALTFPPLTSYSDVFKKPALVC
GQPCPSHSAAFYEHNNKSNLCDKCFKNGGENNSAELIGSSAAAAWTEEETLLLLESVLKH
GHDWELVAQSVSTKSRLDCISKLIELPFGDFLMGSASGRLRSSVPTEDEHLSSPSNLVQQ
MKTDGQEHKETETREENEEDEPPAKRKRAAMMSDGDSYLMKQVAAMACKVGPSVTTAAAK
AAIAALCDEASCPKDIFETTSDYKNSAADRSVGDKDTSDIEEQQEEKEGLEDLPVGLRMR
VSVATALGAAAAHAKVLADQEEREMELLVASVIDQQLKKMKSKLKFLEELEVIMDAEEKV
MEGAKETIIQERISVLQSAFSGGITKRWDHTCVK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgacgacagatcgaagcagcagcaaagacgcagagcttgagcttgagcttgag
ctctacaccatccctgctcaatccagttggttcgtatgggatgatatacacgaaatcgag
agacgcgagtttactgagttcttcagtgagagctctatcactcgaaccccaaaggtctac
aaggagtacagagatttcatcatcaacaagtacagagaagacacctctcgcaggctcacc
ttcaccagcatccgcaagtacctcatcggcgatgtcaatttgctccgcaaagtgtttctc
ttcctcgaaaaatggggtttgatcaatttcctccagaaaagtgatgatgtggtagtggag
gagagtgaagctaagatcgaacaagggaccacccccgctgggattcgagttacttctacc
cctaattctacgagacctgttatcgcacctccccttgttgaggaaagagctgagcctgcc
ctcacatttcccccattgacctcttactcagatgttttcaagaagcctgcgttggtttgt
ggacaaccttgtccttctcattctgctgctttctatgaacataataacaagagtaactta
tgcgacaagtgtttcaagaatgggggggagaacaattccgcagagttgattggcagttct
gctgcagctgcctggaccgaggaagagacccttctcttgctagaatctgtgctcaaacat
ggacatgactgggaactcgttgcacaaagtgtttctaccaagtctagacttgactgtatc
tccaagctcattgagctcccgtttggagactttctgatgggttctgcctccggaagactc
agatcctctgtccccaccgaggatgaacacctttcgtctccatccaatcttgtgcaacag
atgaaaactgacggacaagaacacaaggaaacagagacgagggaagaaaatgaagaagat
gagcctccagcaaaaaggaaacgtgctgcaatgatgtcagatggtgatagttaccttatg
aaacaggtcgcagcaatggcatgcaaagttggtccatctgtcacaaccgctgctgcaaaa
gctgcaattgctgctctttgtgatgaagcctcttgtcctaaagatattttcgaaacaacc
agtgattacaaaaattctgcggctgacagatctgttggagacaaagatacatcagatatt
gaggaacagcaagaagagaaagaggggcttgaggacctacccgtaggtttaaggatgaga
gtgtcagtggcaacagctcttggagccgcggctgctcatgcaaaagtcctggctgatcaa
gaagaaagagagatggaattgttagttgcgagtgtaattgaccaacagctgaagaagatg
aagagcaagttgaagtttctggaggagttggaagtgataatggatgcggaagagaaagtg
atggagggggcaaaggaaacaattatccaagagaggattagcgttctgcaaagcgcgttt
agtggcggtattaccaaacgttgggatcatacttgcgtgaaataa
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