Brassica napus (rape): 106396470
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Entry
106396470 CDS
T04128
Name
(RefSeq) CSC1-like protein RXW8 isoform X2
KO
K21989
calcium permeable stress-gated cation channel
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106396470
Transporters [BR:
bna02000
]
Other transporters
Pores ion channels [TC:
1
]
106396470
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
106396470
NCBI-ProteinID:
XP_013692323
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All DBs
Position
C4:complement(23468133..23473342)
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AA seq
648 aa
AA seq
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MANRGCTRKFIWSHPKCSLSKILKKVQNGCGFIVLHCTLLLQQLVFFSTLTIAKMRLGHI
TSSAPKPSQFTVLIRAIPWHPEQSYSDTLSKYFTNYYSSCYLSHQMVYHNGIIQRLLHDA
ERVCLSLKHVSPEISCKPSLTPCNFCGGPTATNSFHILSNEGDSVKGMELGELTVTTTEQ
ERPAAFVFFKTRYDALVVSEVLQSSNPMLWVSDLAPEPHDVYWRNLNIPYRQLWIRRIAT
LVGAVAFMFVFLIPVTFIQGLTQLEQLSHAFPFLRGILKKKFINQVITGYLPSVILILFF
YAVPPMMMYFSALEGCISRSIRKNSACIKILYFTIWNVFFVNILSGSVIRQLNVFSSVRD
IPAQLARAVPTQAGFFTTYCFTSGWASLACEIMQPMALIWNLAAKAISTNKDESYETLRF
PYHTEIPRLLLFGLLGFTNSVIAPLILPFLLIYFFLAYLIYKNQILNVYITKYESGGKYW
PIFHNTTIFSLILTQIIALGFFGLKLSTVASGFTIPLILLTLLFSEYCRHKFAPIFHKHP
AQVLIDMDRADEMTGKMEELHKKLHSVYSQIPLHLQKSSSNGESSTPFANQELPDPEKLK
PEEGDAIAKELWGFQGNESGQEHDTKSCPSASSPEHLTPKMIELHKRN
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgagggtgcacaaggaaattcatttggagtcatccgaagtgttcactatcg
aaaatcttaaagaaggttcaaaatggctgtgggttcattgtcttgcactgtacattatta
cttcagcagcttgtcttcttctctactttgaccatagccaaaatgaggcttggacatatt
actagttctgccccaaagccaagtcaatttaccgttcttatccgagctattccatggcac
cctgagcaatcttacagcgacaccctgagcaaatacttcacaaattactattcatcatgc
tatttgtcccaccagatggtttaccataatggtatcattcagagactgctgcatgatgca
gagagggtgtgcctgagtctaaaacatgtatctcctgaaatcagttgtaaaccgagtttg
actccatgtaacttttgtggaggacctacagccacaaattcgtttcatatcctatctaat
gaaggtgacagtgtgaaaggaatggagcttggtgagttgactgtgactacaacagagcaa
gaacgtccagctgcttttgtgttttttaagacacgttacgatgcacttgttgtttcagag
gttctacaatcatcaaatcctatgttatgggtgtcggacttagctccagaacctcacgat
gtgtattggaggaatcttaacataccatatcgacaactttggatacggagaatagcaact
cttgttggtgcagttgccttcatgtttgtgtttcttattcctgtgaccttcattcaaggt
ctgactcagttagaacagttgtctcatgcatttccttttctaagaggcatcttgaagaag
aagtttataaaccaggtcatcacagggtacttacccagtgtgatactgattctgtttttc
tacgccgttccaccaatgatgatgtatttttcagccttggagggatgtatatcacggagt
ataaggaagaatagtgcatgcatcaaaatcttatattttaccatttggaatgtgttcttc
gtgaatattttatccgggtctgttatcaggcaactgaatgtcttctctagtgtcagagac
atacctgcacaacttgcaagagcagtgccgacacaggctggcttctttacgacctattgt
ttcacatctggctgggccagtttggcttgtgaaataatgcaacctatggctcttatatgg
aatctggctgcaaaagctatttcaacgaacaaggatgagtcatacgaaacacttaggttc
ccataccataccgaaattcctcggttgcttttgtttgggctcctgggtttcaccaactca
gtcatagcgccacttattctaccgtttttgctgatatacttcttccttgcatatctaata
tacaaaaatcagatactcaacgtgtatattacgaagtacgaaagcggtggaaaatactgg
cctatctttcacaacacaacaatcttctcactgatcttgacacagattattgctttgggt
tttttcggactaaagctatcaacggttgcttcgggtttcaccataccgttaattcttctc
actctgctctttagtgagtattgccggcataaatttgcgccaatattccataagcatccc
gctcaggttcttatagacatggacagagctgatgaaatgacaggaaagatggaagagtta
cacaaaaagttgcatagtgtatactcccaaataccattacaccttcagaaatcatcgagc
aacggtgaaagcagtactcctttcgcaaatcaggagttaccagatcctgagaaattgaag
ccagaggaaggggacgccatagctaaagagttatggggcttccagggcaatgaatctggt
caagaacatgacactaagtcatgtcccagtgcttcttcaccagagcatttaacccctaag
atgatcgagctccacaaacggaactag
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