KEGG   Brassica napus (rape): 106396774
Entry
106396774         CDS       T04128                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-3
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
bna  Brassica napus (rape)
Pathway
bna03010  Ribosome
bna04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    106396774
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106396774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:bna03011]
    106396774
   04121 Ubiquitin system [BR:bna04121]
    106396774
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    106396774
Ribosome [BR:bna03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    106396774
  Archaea
    106396774
Ubiquitin system [BR:bna04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   106396774
Exosome [BR:bna04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106396774
  Exosomal proteins of colorectal cancer cells
   106396774
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD Ubiquitin_5 UBL_UBAC1 DUF2604 Thioredox_PDIA6_C OTU1_UBXL
Other DBs
NCBI-GeneID: 106396774
NCBI-ProteinID: XP_048609821
LinkDB
Position
C4:complement(29099676..29100410)
AA seq 157 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE
CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGAEA
NT seq 474 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacgatcaccctcgaggtcgaatcctcg
gacaccatcgacaacgtcaaggccaagatccaagacaaggaaggcatcccgccggaccag
cagcggctgatcttcgccgggaagcagctcgaggacggcaggaccctcgccgactacaac
atccagaaggagtcgacgcttcacctcgtcctccgcctccgcggtggcgcgaagaagagg
aagaagaagacgtacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gcggtgctccagttctacaaggtcgatgggtctggtaaggtgcagaggctgaggaaagag
tgtcctaacgccacttgtggggctgggacgttcatggcgagtcatttcgatcgtcattac
tgtggtaagtgtgggcttacttacgtttaccagaaagagggtgccgaggcttga

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