KEGG   Brassica napus (rape): 106396780
Entry
106396780         CDS       T04128                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    106396780
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106396780
Enzymes [BR:bna01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106396780
Protein phosphatases and associated proteins [BR:bna01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106396780
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106396780
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 106396780
NCBI-ProteinID: XP_048594566
LinkDB
Position
A8:9620256..9624203
AA seq 801 aa
MEHLSESQINEDVSLKNNPPDKEDTDKDTNMEQPPTSPRHRKVIARWLPNEAQRPIVDDA
PVFSPSLEEFEDTLAYIEKIRPLAEPYGICRIIPPSTWKPPCRLKEKSIWEHTKFPTRIQ
TVDLLQNREPMMKKKKPKSRKRKRRRNSRMGSSKRRSGSGSGSSPEAEEKFGFNSGSDFT
LEEFERYALYFKEAYFEKKDSPSVEEIEGEYWRIVEQPTDEVEVYYGADLENRVLGSGFY
KKADSDKGQYAVSGWNLNNLPRLPGSVLSFEDCDISGVLVPWLYVGMCFSSFCWHVEDHH
LYSLNYHHFGEPKVWYGVPGSNATSLEKAMRKHLPDLFEEQPDLLHSLVTQFNPSILKDE
GVQVYRVVQNPGEYVLTFPRGYHAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRK
TSLSHDKLLLGAAYEAVKALWEPSVSCVVKEKNTWKSFCGKNGALTKAIQARLGMEEERL
GDLGRDSSLRLVKMEKDFDSNSERECSSCFYDLHLSASGCKCSPEEYACLRHSDDLCSCE
VKDRFVLVRYTMDELRSLVRALEGEMDDLNIWASKVLGIEHSDKDQNNTGSVINEEKKLE
KGSFDLNINLELNYHEDLKEEVSTSGELNASGNFDVSVEPINLGFLSFGKLWCNKHAIFP
KGFTSRVKFYNVLDPTRMSNYISEVFDAGLMGPLFRVTLEESPDERFFNVSAQKCWEMVL
QRVKDTSTNLGLPILSRFESINGLQMFGFLSPSIVQAIEALDPNHKLVEYWNHKNQSQSE
SKDHFISSNCTKGKLFGVDLM
NT seq 2406 nt   +upstreamnt  +downstreamnt
atggaacatctcagtgaatctcagatcaacgaggatgtgtctttaaagaataatcctcca
gacaaagaagatacggacaaagacactaacatggaacaaccacctactagtccacgtcat
cgaaaggttattgctagatggttacctaatgaagcgcagagaccaatcgttgatgacgct
cctgttttctcaccatcattagaggagtttgaagatacacttgcttacatagaaaagata
cgtccattagcagagccgtatggtatctgtcgaatcatcccaccatccacatggaaacct
ccttgccggctcaaggagaagagcatatgggagcatacaaagtttcccacacggattcag
accgtggacctgcttcagaaccgggagcctatgatgaagaagaagaagcccaagagcagg
aaacgcaaacggagaagaaactccagaatgggttcctctaagagacgatctggctctggt
tctggctcttctcccgaggcagaggagaaattcgggtttaactccggttcagacttcact
ctggaagagtttgagagatacgctctgtattttaaagaggcatacttcgagaagaaggat
tctccgtctgtggaggagatagaaggcgaatactggcggatagtggagcagccaacagat
gaagtggaggtatactatggagctgacttggagaacagggtgcttggaagcggattttac
aagaaagccgatagcgataagggtcagtacgcagtctctggctggaacttgaataactta
ccgcgtctccctggctctgtactctcttttgaggactgtgatatctctggagttctagtc
ccatggctctatgttggaatgtgcttttcttcattttgttggcatgtggaggaccatcat
ctatactcactgaactatcatcactttggggagccaaaagtatggtatggtgttccggga
agcaatgcaacatcactcgagaaggcgatgaggaaacatctgcctgatctgtttgaagaa
cagcctgatctacttcacagcctggttactcaatttaatccttcgatcctgaaagatgaa
ggagtccaagtttaccgggtggttcagaacccaggggagtatgtgctgacgttccctagg
ggttaccatgctggattcaactgcggtttcaactgtgcggaagcggttaatgtagctccg
gttgattggttggctcatgggcagaacgccgtggagctttacagtaaagagacgaggaag
acttctctgtctcatgacaaacttctcctcggagcagcttatgaggctgtaaaggctctt
tgggagccctcagtttcttgtgtggtgaaagaaaaaaatacatggaagagtttctgtggg
aagaacggtgcgcttaccaaggcgattcaggctcggttaggaatggaagaggaaagactt
ggagatcttggaagggattcttctttgagattggtgaagatggagaaggactttgattca
aacagtgaaagggaatgctcctcgtgcttttatgatctgcatctctccgcttctggctgc
aagtgctctcctgaagaatacgcgtgccttagacactcggacgatctatgttcatgtgaa
gtgaaggatagattcgtccttgtccgttacaccatggatgagttacggtcactggtcagg
gcattggaaggggaaatggacgatttaaatatatgggcttctaaggtgttaggtattgaa
cacagtgataaagatcagaataacactggttcagttatcaacgaggagaagaagctagag
aaaggttcgtttgatctgaatatcaacttagagttgaattatcatgaagacctgaaagaa
gaggtcagcaccagtggcgagttaaacgcttcagggaactttgatgtatcggtcgagcct
ataaaccttggtttcttgagttttggaaagctttggtgcaataagcatgctatattccca
aaaggattcacgagtcgtgtcaagttctacaacgtgcttgatccaacaaggatgagcaat
tacatctccgaggtttttgatgcaggactcatgggtccattgttcagggttactctggaa
gaatctccagacgagcgcttcttcaatgtctcagcccaaaaatgctgggagatggtgttg
cagagagttaaagatacatccacaaatcttggtcttcctattttatcgcggtttgaaagt
atcaacgggctccaaatgtttggtttcctctcgccgtctattgttcaagccattgaagct
cttgatccaaaccataaactggtcgagtactggaaccacaagaaccaatctcaatccgag
tcgaaagatcacttcatatcatcaaactgtaccaaaggaaaacttttcggagtagatttg
atgtag

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