Brassica napus (rape): 106397343
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Entry
106397343 CDS
T04128
Name
(RefSeq) tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106397343
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106397343
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106397343
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
106397343
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class I (G)
106397343
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106397343
Prokaryotic type
106397343
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_1b
DUF249
Motif
Other DBs
NCBI-GeneID:
106397343
NCBI-ProteinID:
XP_013693388
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Position
C4:51200165..51203184
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AA seq
397 aa
AA seq
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MAHATPSHSLILSSSRFSRLGYSTRFLRHANPLSLPLTRQRFRCYCSDQTSPSARKRVVS
GVQPTGSIHLGNYLGAIKNWVALQDTYETLFFIVDLHAITLPYDPQELRKATRDTAALYL
ACGVDISKASVFVQSHVRAHVDLMWLLSSSTPIGWLQKMTQFKEKSRKEGGENASVSLLT
YPVLMAADILLYKSDFVPVGEDQKQHLELARDLAQRVNNLYGGRKWKKLGGRGGSIFKIP
EPLIPQVGARVMSLTDGRSKMSKSAPSDQSRINLLDSKDLIADKIKRCKTDSFVGSLEYD
NAERPECNNLLSVYQIVSGKTKEEVMEECKDMSWGTFKPLLTDAVVEHLSPIQVRYQEIT
AESAYLDKVLTEGADKATEIAEVTIRNLKQAMGFFYI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgcgactccctctcactccctcatcctctcttcctccaggttctctcgtctc
ggctacagcaccagatttctcagacacgcaaaccctctttctcttcccctaaccagacaa
agattccgatgttattgctccgaccagacttctccttctgcaaggaaacgtgtggtctct
ggagtccagcctacaggctcaattcaccttggaaactatctaggcgctatcaagaactgg
gtcgcccttcaggatacatatgaaacactctttttcattgtagaccttcatgcgataaca
ctaccatatgacccgcaagaactaagaaaggcaactagggataccgcagcgctctatcta
gcatgtggtgttgacatttctaaggcttcggtgtttgtgcaatctcacgtccgtgctcat
gtggacttaatgtggcttttgagttcatccacacctattggttggctacagaaaatgact
cagttcaaagaaaaatcacgcaaggaggggggtgagaatgcttctgtgtctttgttaaca
tatccagttctgatggctgctgatatcctcttgtataagtcggattttgtccctgtgggt
gaggaccagaagcagcatttagagcttgcccgcgacctggcacagcgtgtgaataattta
tatggtggaaggaagtggaagaagcttggagggcgtggtggttcgatatttaagatacca
gaaccactcataccacaagttggagctcgagttatgtctcttacggatggtcgttccaag
atgtccaagtctgcaccttctgatcagtcccggatcaatctccttgactcaaaagatttg
attgcggataaaataaaacggtgcaagacagactcatttgtaggcagccttgaatatgac
aatgcggagaggcctgagtgcaacaatctcctctctgtatatcagattgtctcaggcaag
acaaaagaggaagtgatggaggaatgcaaagatatgagctggggcacatttaagcctcta
cttacggatgctgtggtcgagcatcttagtccaatccaggtccgttatcaagagataaca
gcagagtcagcgtatttggataaagtattgacagaaggtgcggacaaagccacggagata
gcagaagtcacaattcgcaatttaaaacaagcgatggggttcttctatatatga
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