Brassica napus (rape): 106397437
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Entry
106397437 CDS
T04128
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03410
Base excision repair
bna03420
Nucleotide excision repair
bna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106397437
03410 Base excision repair
106397437
03420 Nucleotide excision repair
106397437
03430 Mismatch repair
106397437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106397437
03036 Chromosome and associated proteins [BR:
bna03036
]
106397437
03400 DNA repair and recombination proteins [BR:
bna03400
]
106397437
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106397437
DNA Replication Termination Factors
ELG1-RFC complex
106397437
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106397437
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106397437
Check point factors
HRAD17(Rad24)-RFC complex
106397437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_11
AAA_16
AAA_5
AAA_14
ResIII
DEAD
SLFN-g3_helicase
AAA_24
nSTAND3
PhoH
AAA_28
AAA_19
AAA_assoc_2
AAA_7
AAA_30
AAA_2
RNA_helicase
Parvo_NS1
AAA_25
DUF815
NPHP3_N
IstB_IS21
TIP49
AAA_18
bpMoxR
NB-ARC
Motif
Other DBs
NCBI-GeneID:
106397437
NCBI-ProteinID:
XP_048612750
LinkDB
All DBs
Position
C5:13365385..13368523
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AA seq
337 aa
AA seq
DB search
MAPVIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSSNRQGGYPCPSFKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
NRILHICNEEGLNLGGEALSTLSTISQGDLRRAITYLQSGARLFGSTITSTDLLNVSGVV
PLEVVKRFFTACKSGDFDIANKQVDNIVAEGYPASQIINQLFDIVVEAGDDITDNQKAKI
CKCLAETDKRLVDGADEYLQLLDVASNTITALSEMDF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttattcagagcacacagccatgggttgagaaataccggccgaagcaggtg
aaggacgtggcgcatcaggaggaggtggttcgggtcctcaccaacactctagagactgct
aactgtccgcacatgctcttttatggaccgccaggcacagggaaaaccactacggcactt
gccatcgcccaccagctatttggacctgaattgtacaagtcaagggtgttggagctgaat
gctagtgatgacagagggatcaatgttgttcggacaaagattaaggattttgctgctgta
gctgttgggtccagtaaccgtcaaggtggttatccttgcccatcatttaagatcatcatc
ctagatgaggctgattcgatgacagaagatgctcagaacgccttgaggcgcacaatggaa
acttactccaaagtcaccagattcttcttcatatgtaattatatcagcaggatcatagag
ccccttgcttcaagatgtgcgaagtttaggtttaaaccactttctgaagaagtcatgagt
aaccgtatattgcatatttgtaatgaagaaggtctcaaccttggtggtgaggctctttca
actttgagcaccatatcacaaggtgatctccggagggctatcacgtatctgcagagtggt
gcccggttgtttggatcaacaataacttctacggatttactcaatgtgtctggggtagtc
cctctggaggtagtcaagagattttttactgcatgcaaaagtggtgatttcgatattgcg
aacaagcaagtggacaacatagttgcagaaggatatcctgcatctcaaatcatcaatcag
ctatttgatatagtcgttgaggctggtgatgacataacagacaatcaaaaggctaagatc
tgcaaatgtctagctgaaacagataagcgacttgtagatggtgcggatgagtacctgcag
cttctggacgttgcaagcaatacgattactgcactctcagaaatggacttttaa
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