Brassica napus (rape): 106397455
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Entry
106397455 CDS
T04128
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI12 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106397455
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
106397455
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
106397455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
UBA_ARI1
zf-C3HC4
RING_XB3-XBAT31
IBR_2
UBA_ARIH2_N
Ariadne
zf-C3HC4_2
MsyB
DUF4193
Motif
Other DBs
NCBI-GeneID:
106397455
NCBI-ProteinID:
XP_013693491
UniProt:
A0A816KQ54
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Position
C5:2225945..2231003
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AA seq
520 aa
AA seq
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MDDSDIKRLGEILITAEEEEELNTPDEHDHTETSTHQSYVTILKEGDIRSRMKEEIQRVS
NTYSISKDDATLLLAHFRWDDIELHKNWSDNAKTVRESVGIFELERPLDLPSDDKNFYCG
ICFKIHSLERSASVSCGHRVCKFCWRSHINKRINEIADVDWYGTLKCPYCPASFGWDMIE
SFACEEEKTKYYRYLFRSYVEGSKVIKCCPAKGRSCDVHLTPGSGNFDVLCLCLLSFCWN
CSQDTHSPMDCESAAKWLRMNSSDYQDPNWVRENTVPCPRCKLRIRENQDWSLKMRCFPP
CNYDFCWRCRGQWTEHGLDLYTCTHDEVSYEETVFGNMAEYAAGRYKDCHEKWMSNESLM
QKAKAKLQQLHTDVIPDLSNKQLATVQQLEFIAEAWSQIMECRRVLKWTYAYEYYLGEDQ
VEKQAFLKLKQDNAEIPLEKLNYHAENQLNMLLDSDGPSENFNRFRSDLTDSTRITRNHY
ELLVRDLEDGLSNVVGASTSQRARNEDDASGSSSIHDDLF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcagatatcaaaaggctgggcgagatccttattacagcggaggaggaggag
gagttgaatacacctgatgaacatgatcacaccgaaacatctacccaccagagttatgta
accattctgaaagaaggagatatccgaagtcgtatgaaagaagagatccaacgtgtttca
aatacttactcaatctccaaagacgacgccacacttctgctagcccactttcgctgggat
gatattgaacttcataagaactggtctgataacgctaaaactgttagagaaagcgtcgga
atatttgagttggagagaccacttgatttaccttctgacgacaaaaatttctattgcgga
atctgcttcaaaatacactcacttgagaggtctgcatcggtctcatgtggccatcgtgta
tgcaagttctgctggagaagtcatatcaacaaaagaatcaatgagattgcagatgttgac
tggtatgggacattaaaatgtccatattgtccagcttcctttggttgggacatgatagag
agttttgcttgcgaggaagagaaaactaagtactatcgatatctctttagatcttacgtt
gaaggcagcaaagtgataaaatgttgtcctgctaaggggcgtagctgcgatgttcatctt
actcctggttccggaaactttgatgtcttatgtctctgcctgcttagtttctgttggaat
tgcagccaggacactcacagtccaatggactgtgaatcagctgcaaaatggttaagaatg
aacagttctgattaccaagaccccaactgggtacgagagaacacggtgccttgccctagg
tgtaagctaaggatcagagaaaatcaagattggtcactgaagatgagatgctttccacct
tgcaactatgacttctgttggcgctgccgtggtcaatggactgaacatggcttagattta
tacacttgtacccatgatgaggtctcgtatgaagagactgtttttgggaatatggcagaa
tatgctgcaggtagatacaaagactgtcatgaaaagtggatgagtaatgaatcgttgatg
caaaaggcaaaagcaaaactccagcaactacacactgatgttattccggatttgagtaac
aaacagttagcaactgtacagcagcttgagttcattgcggaagcttggtctcagatcatg
gaatgtagaagggtcctgaaatggacttatgcttatgagtattacctaggagaggaccag
gtcgaaaagcaagctttcttgaagcttaagcaagacaatgcagagattcctctggagaag
ctcaattaccatgcagagaatcaactgaatatgttgcttgactcagatggaccatcagag
aattttaatagattccgcagcgatttaactgactcaactagaataacgagaaatcactac
gagcttcttgtaagagatcttgaagatggcttaagtaatgttgtcggtgcttcaacgtcg
caaagggcacgtaacgaggatgatgctagtggttcgagcagtatacatgatgatttattt
taa
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