Brassica napus (rape): 106397866
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Entry
106397866 CDS
T04128
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106397866
03083 Polycomb repressive complex
106397866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106397866
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106397866
Histone modification proteins
HAT complexes
HATB complex
106397866
HDAC complexes
Sin3A-HDAC complex
106397866
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106397866
PRC2.2
106397866
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106397866
Heterochromatin formation proteins
Other heterochromatin formation proteins
106397866
Chromatin remodeling factors
NuRD complex
106397866
NuRF complex
106397866
NuRF complex (fruit fly)
106397866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
106397866
NCBI-ProteinID:
XP_013693946
UniProt:
A0A816R4P9
LinkDB
All DBs
Position
C1:5417085..5420502
Genome browser
AA seq
485 aa
AA seq
DB search
MESEVAAKARREAETPATYIGLKTRAQRAKLSNGSVSASSHQPRSTEKKKKKSHKPTVDN
KYSQWKTLVPILYDSLSNQSLVWPCLSCRWGPQFEQALAKNQQRLYLTEQTDGSVPNTLV
VANCEAVKKQLNGEACSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDTE
TQPDRHAVLGAPHSRPDLILTGHQDNAEFALAMFPTEPFVLSGGKDKSVVLWSIQDHITT
AGTDSKSPGSSIKQTGGRSVGPRGVYHGHEDTVEDVAFCPSSAQEFCSVGDDSCLILWDA
RTGTGPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRLFDCRNLTSNGVGSPIYKF
EGHNASVLSVQWSPDKSSVFGSAAEDGLLNIWDYDKVGKKSARAPKSPPGLLFQHAGHRD
NMVDFHWNVLEPWTIVSVSGNCESNGGGGTLQIWRMSELIYRPEDEVLAELEDFKSQVFS
CASRP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgaagtagcagcgaaggcgagaagagaagcagagactccggcgacgtacatt
ggactgaagacgagagctcagagagctaaacttagcaacgggtctgtgtcagcatcttcc
caccagccgagaagcaccgagaagaagaagaagaagagtcacaaacccactgttgacaac
aagtactctcagtggaagactcttgttcccattctctatgactcactctccaaccagagc
ctcgtctggccttgtctctcttgcagatggggaccacagtttgagcaagcattggctaag
aatcagcagcgtctctacctcacggaacaaactgatggcagtgtgcctaataccttggtc
gtagctaattgcgaagctgttaagaagcagcttaatggagaagcatgctctccatttgtg
aagaagtacaagacaatcatccaccctggagaggtcaacagaatcagggaactgccacaa
aatagtaagattgtagctactcacaccgacagtcctgatgttctcatatgggacactgag
actcaaccagaccggcatgctgtacttggagctccacattctcgtcctgatttgatacta
actggacaccaggataatgctgaatttgctcttgcgatgttcccaaccgaaccttttgtt
ctttctggaggcaaggacaagtcggttgttttgtggagtatccaagatcacatcacaaca
gctggtacagattccaaatcccctggatctagcatcaaacagactggtggtcgttccgtt
ggccctcgaggtgtatatcatggccacgaggatacagttgaagacgtcgcattctgtcca
tctagtgcacaggagttctgcagtgttggtgatgactcttgtcttatactatgggatgcg
cgaaccggcacaggtcctgccatgaaggttgagaaggcacatgatgctgatcttcactgt
gtcgattggaatcctcatgacaacaatctgatcctgacagggtcagcagataacactgtc
cgtttgttcgactgccgaaacctgacctcaaatggagttggctctcctatctacaaattt
gaaggccacaatgcttctgttctttctgttcagtggtctcctgataagtcatctgttttt
gggagtgctgcagaagatggtctcttgaacatatgggattatgacaaggtcggcaagaag
tctgcgcgtgcacccaaaagccctcctgggcttctcttccagcatgctggtcacagggac
aacatggtcgacttccactggaacgtattggaaccttggactattgtcagtgtttctggt
aactgtgagagtaacggtgggggtggtacactgcagatatggcggatgagtgagttgatt
tacagaccggaagatgaagtactggcagagctagaggacttcaagtcacaggttttctca
tgtgcctccaggccttga
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