Brassica napus (rape): 106398396
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Entry
106398396 CDS
T04128
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106398396
03460 Fanconi anemia pathway
106398396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106398396
03036 Chromosome and associated proteins [BR:
bna03036
]
106398396
03400 DNA repair and recombination proteins [BR:
bna03400
]
106398396
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106398396
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106398396
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
106398396
FA (Fanconi anemia) pathway
Downstream FA components
106398396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Orbi_NS1
DUF4503
Motif
Other DBs
NCBI-GeneID:
106398396
NCBI-ProteinID:
XP_048628137
LinkDB
All DBs
AA seq
1051 aa
AA seq
DB search
MSTWQLLPDSSGDGFRWDAGGRILQSGKSDSPATTAPPLPSMADLLLRGCSKLIEPEESK
PTMFTTALGKSVALKDSSLSRAKSILSDSDDVALSRESGFGVPNSCFQTASNKKVNVSSA
GMARAKALLGLEEEDEFSVFKHVNHRLPSSHQQQHGLRTPETFGAEHRSVTPGGHNVSGK
RCEILSSSPKVPQTKFQTAGGRSLSVSVEALNRARSLLGDPELGPFFDDVDHFVTPQKDK
WIGGDIAHESNKHTSNSFISPLQSSSKQFRSVKLEDVASGVNLIKKFDAAVDETHGNTPL
ASDKAVTNTMGTGFIPRSSQFGRQAHQPLVDITNRNDIAHANSNNRQESSQKKRLGKTVS
VPPFKRPRTSSFKTPLMKNDQHPSNGFSVVSCDTQYSKRVLSTRTEERSPRIYIKDYFGM
RPRATTKMAVPEHVRRIKSSNADKYAFGDVSSSSVVGAETFHQMLAESGASLQCASREWV
TNHYRWIVWKLACYETYYPAKCRGNFLTITNVLQELRYRYEREVNHGHCSAIMRILSGDA
PASSMMVLCISAINPETRETHGSDSGNNVKIELTDGWYSINAALDVMLRKQLNAGKLFIG
QKLRILGAGLSGWSTPTSPLEAAISNTIYLLLHINGTYRAHWADRLGFCKEVGVPLALNC
IKCNGGPVPKMLAGITRIYPILYKEKLGEKKSVVRSERMEWRMIELHNQRRSDLIEGLIC
EYQGGINGVDSQNDTDSKEGAKLFKLLESAAEPDFLMADMSMEELNCFNRYKEKFEAAME
KKMEKSVAKALEDAGLGERDVTPFMRIRLVGLTSLSYDGHPNPKEAILTIWNPTETQRTE
LTEGKIYAMKGLVPMNIDSETLYLHAKGSSSRLQPLSPKASERFQPFFNPRKSMSLLDLG
EIPLGSEFDMAAYVVYVGNAYTDVDQKKQWVFVTDGSLQYSDSGKIANRLLAISFRTSSM
DDLHSPLISHNLVGSVVGFCNLIKRAKDVENDMWVCEAMENSDYFLNADAPCPSHLKTSS
GHIQIWANLSFSKSVRSLSIIYYIIFYQMHR
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagctattacccgattcaagcggcgacggtttccggtgggatgcaggt
ggccggattcttcagtctggcaaatccgattctccggcaaccacagctccccctctacct
tccatggcggatctcttgctccgaggatgctcgaaacttatagaaccagaggaatcgaag
ccaacaatgttcacgactgctctgggcaaatctgttgctcttaaagactcttcgctttcc
agagccaaatcgattttatcagattcagacgatgtcgctctctccagggagagtgggttt
ggtgttcccaactcttgtttccagactgcttctaacaagaaggttaacgtgtcttctgct
ggtatggcaagagccaaggcattgttaggactagaagaagaagatgagtttagtgtattc
aaacacgtgaaccaccgtttgccttcttcccaccagcagcaacatgggttaaggactcct
gagacgtttggtgctgagcatcgttctgtaactccaggaggacataatgtatctgggaaa
agatgtgaaattttgagttcatctccaaaggttcctcaaacaaagtttcaaactgctggt
gggagatcattgtcagtgtcagtcgaagccttgaatcgtgccagaagccttcttggggac
cctgagttagggcctttctttgacgatgttgatcactttgttacaccccagaaagataaa
tggataggtggtgatattgctcatgagagcaacaagcatacatctaatagtttcatatct
cctcttcaatcttcttcaaagcaattcagatcagtcaaattggaggacgtagcttccggg
gttaatttgatcaagaaatttgatgcggctgttgatgagacacatggtaacacgccttta
gcatctgataaggcagttactaataccatgggaaccggtttcattccaagatcttcacaa
tttggaaggcaagctcaccagccacttgtcgatatcacaaatcgcaatgatatagctcat
gctaacagtaacaatagacaagaaagtagccaaaagaaaagactgggaaagacagtctcc
gttcctccttttaaaaggccgagaacctcctcctttaaaactcctctaatgaaaaatgac
cagcatccttcaaatggtttttctgtagtatcttgtgatacacaatattccaaaagggtg
ctttctacaagaactgaagaaaggtctccaagaatatatatcaaggattattttggaatg
cgtccaagagctacgaccaagatggctgtgccagaacatgtcagacgaatcaaatcaagt
aatgcagataaatatgcatttggtgatgtctcttcttcaagtgtggtgggagctgaaact
tttcatcagatgttggcagaatctggtgcttccttacaatgtgcatctagagagtgggtc
accaatcactacaggtggatagtttggaaactcgcatgctacgagacatactacccagcc
aaatgcagaggaaactttctgacgatcaccaatgtcctccaggaactaagatatagatat
gagagagaggtcaatcatggtcactgctctgcaataatgaggattctgagtggtgatgct
ccagcttcttcaatgatggtgctctgcatatctgctattaatccagagactcgagaaaca
catggttctgatagtggcaacaatgtgaaaatagaactcactgatgggtggtactcgata
aatgctgctctggatgtcatgctgcgaaaacagctgaatgctggaaaattgtttattggg
cagaagcttcggattcttggggcaggactttctggctggagtaccccaacatcacctctt
gaggcagcgatttcgaatacaatctatttgttgttgcatattaatgggacatacagagct
cactgggcggaccgactaggattctgtaaagaagttggtgtccctctggctctcaactgt
atcaagtgcaatgggggccctgtgcctaaaatgttagctggaattacacgaatataccct
atcctatacaaggaaaagttaggtgaaaagaagtcagtagttcgatcagagaggatggaa
tggagaatgatcgagctgcataaccagaggcgctcagatcttatagagggtcttatatgt
gagtaccagggaggaatcaatggtgtcgacagccagaacgatactgacagcaaagaagga
gccaagctctttaagctgttagagtctgctgctgaacctgatttcctaatggcagatatg
agtatggaagagttgaactgtttcaatagatataaagaaaagtttgaggcggccatggag
aaaaagatggaaaaatcagttgcaaaagctctggaagacgctggcttaggtgaaagggat
gtcactccattcatgaggattaggcttgttggactgacgagcttaagttatgatggacac
ccaaatccaaaagaagccattttaacaatctggaatccaacggagacacagagaaccgag
ttgacagaggggaaaatatacgcaatgaaggggctggtaccaatgaacatagattcagaa
acactgtacttacatgccaaaggatctagctcaagattgcagcctttgtctccaaaagct
tctgaaagatttcagccctttttcaacccccgtaaatcgatgtcattgttggatcttggt
gaaattcctcttggaagtgaatttgatatggcggcgtacgttgtatatgttggaaatgcg
tacacggatgttgaccaaaagaagcagtgggtgtttgttacagatggatccttacaatat
tcagattcagggaaaatcgcaaacagacttctcgctataagcttcagaacatcatccatg
gatgacctccacagccccctcattagccataatcttgtcggatctgtggtagggttctgc
aatctaataaaaagagccaaggatgtggaaaacgatatgtgggtttgtgaggcgatggag
aattcggactacttcttaaacgcagatgctccttgcccttctcaccttaaaaccagcagt
ggccatatccaaatatgggctaacctctctttttctaaatccgtccgttctctttctatt
atttattatataatcttttaccaaatgcatagatga
DBGET
integrated database retrieval system
