Brassica napus (rape): 106398733
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Entry
106398733 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 5 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106398733
00071 Fatty acid degradation
106398733
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106398733
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106398733
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106398733
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106398733
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106398733
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106398733
Exosomal proteins of breast cancer cells
106398733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106398733
NCBI-ProteinID:
XP_013694697
UniProt:
A0A816X5E9
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Position
A2:complement(16729477..16734262)
Genome browser
AA seq
666 aa
AA seq
DB search
MTSEKRFIYEVEAAKEATDGKPSIGPVYRSTLAKDGFPDPIDGIHSCWDIFRTAVEKYPN
NRMLGQREIVNEKAGKYEWKTYKEVYDIVIKLGNSLRSCGFEEGGKCGIYGANCPEWIIS
MEACNAHGLYCIPLYDTLGAGAVEFIISHAEVAIAFVEEKKIPELFKTCPNSTKYMKTVV
SFGGVKPEQKEEAEKLGLVIHAWDEFLKLGEGKQYELPVKKKSDICTIMYTSGTTGDPKG
VLISNESIVTITTGVMHFLQSVNESLTEKDVYISYLPLAHVFDLAIEECIIQVGGSIGFW
RGDVKLLIEDLGELKPSIFCAVPRVLDRVYTGLQQKLSVGGFFKKKVFNVAFSYKFGNMK
KGQSHVAAAPFCDKLVFNKVKQGLGGNVRIILSGAAPLASHIESFLRVVACCHVLQGYGL
TESCAGTFVTFPDDLDMLGTVGPPVPNVDIRLESVPDMEYDALGSTPRGEICIRGKTLFS
GYHKREDLTKEVLIDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLAQGEYVAVESLENVYG
QVEAIDSVWVYGNSFESFLIAVVNPTQRTLESWAVENGVDGDFNSICQNAKAKAFILGEL
VKAGRERKLKGFEIIRAVHLEPVAFDIERDLLTPTYKKKRPQLLKYYQNVIDEIYKAAKE
GQGSGQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagagaagagattcatctacgaggtggaagctgctaaggaagccaccgatgga
aaaccctccattggtcctgtctatcgcagtactttggccaaagacggattccctgacccg
atcgacggtatccacagctgttgggatattttccgcacggctgttgagaaatatccaaac
aaccgaatgcttggccaacgtgagattgtgaacgaaaaggcaggaaagtacgagtggaaa
acatacaaagaagtatatgacattgtcattaaacttgggaattctcttcgcagctgcggg
tttgaggagggaggaaaatgtggtatctatggtgcaaattgtcctgaatggatcataagc
atggaggcctgtaatgcacacggcctctattgtatccctctatacgatacattaggcgct
ggtgcagtggagttcattatttctcacgcagaggttgcaattgcttttgtggaggagaag
aaaatccctgagctttttaagacatgtccaaactctacaaaatatatgaagactgttgtg
agctttggtggcgtcaaaccggaacagaaagaagaagctgaaaagttgggtttggtaata
catgcttgggatgagttcttgaagttgggtgaaggtaaacaatatgagcttccggttaaa
aagaaaagtgacatatgcacgattatgtatactagcggaaccactggtgacccaaaggga
gttctaatttcaaacgagagcattgttactataacaactggagtgatgcatttcctacag
agtgtgaacgaatcactaactgagaaggatgtatatatttcgtatcttcctcttgctcac
gtctttgacctggctatcgaggaatgtatcattcaagtgggtggttcaattggtttctgg
cgcggggatgtcaagctgttgattgaagaccttggggagctaaagccaagtattttctgt
gctgttccccgtgtcctagaccgagtatacacagggctgcagcagaaattatctgttggc
ggtttcttcaagaagaaggttttcaatgttgcattttcctataaatttggaaatatgaag
aagggacagtctcacgtcgcggccgctccattctgtgacaaacttgtcttcaacaaggtt
aaacaaggactgggaggaaatgtgaggattattctatctggagcagctcctcttgctagt
cacatagagtcatttcttagagttgtggcatgttgtcatgttctacaaggatatggtcta
actgagagctgtgctggaacatttgtcacgttcccagacgacctggacatgcttggtaca
gttggtccacctgtgccaaacgtagatatacgcctggaatctgtaccggacatggaatat
gatgctcttggaagtaccccgcggggcgaaatctgcatccgtgggaaaacccttttttct
gggtaccacaaacgtgaagacctcacaaaagaggttcttattgatggatggtttcacaca
ggtgatgttggtgagtggcaaccagatggaagcatgaagataattgaccggaaaaagaac
atattcaaactagctcaaggagagtatgttgcagttgagagtttagaaaacgtctacggt
caagtagaggccattgattcagtatgggtgtatgggaacagctttgagtccttccttatc
gcagttgttaacccgactcagcgaactcttgaaagctgggccgtagagaacggagttgat
ggagacttcaactctatctgtcaaaatgcaaaagcaaaagcattcatacttggagaactt
gttaaggcaggcagagagagaaagttgaaaggttttgagatcattagagctgttcatttg
gaaccggtggctttcgacattgaaagagatcttcttactcctacctacaaaaagaagagg
cctcaattgctcaaatactatcaaaatgtgattgatgagatatacaaggctgcaaaggaa
ggtcaaggttcaggacagtag
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