Brassica napus (rape): 106399104
Help
Entry
106399104 CDS
T04128
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106399104
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106399104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
YmiC
Motif
Other DBs
NCBI-GeneID:
106399104
NCBI-ProteinID:
XP_048615394
LinkDB
All DBs
Position
C5:54451893..54454520
Genome browser
AA seq
558 aa
AA seq
DB search
MAQNSTLFTAISLLVFSIFSHCQALTLEALCESTPHPPVCKSVLPVGSPGSVSGFASIVI
LKSLEASKHLLASFDQHHPTSGPLDDCQSLAGLTVDQLTRVNVIKETVLGTSEVNDLLTL
LSAAITNYETCLGSFHDATGESPENFVKDHHDILTRVSDGIKLISVSLALSKEAWPIASD
ASVTKPPPRILTEDEKKSSSPEVSYVKVTKRERMIYESFKVLGRKLLQSSPGGNGGLKVA
KTVVVNPNGINGDAYKTINDAIAAAPTKAESENGYFVIYVVAGVYEEYVTVPSNKSYVMI
VGDGIDKTIITGNRNVVDGSTTFASATLAVIGRGFMAANITVRNTAGPTKHQAVAVRNSA
DMSAFYKCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAATVLQNCNIIPRLPLQGQ
FNAITAQGRSDPNQNTGISIQNCRITPSAELVSSNFSVKTYLGRPWKEYSRTVYLQNFMD
GFIDAKGWNEWMGDFALQTLYYAEFNNTGPGSGTANRVNWPGYHVINETEAVWFTVSNFI
VGDYWLPSMGVPYAGGLM
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaatagtactctgttcacggccatctctttgcttgttttctctatcttttct
cattgtcaagccctaactttggaagctctttgtgaatccactcctcacccgcccgtctgt
aaatccgttctaccagtcgggtcacccggttcagtttcaggatttgccagtattgtcatc
ctaaagtctctagaagcttctaaacaccttctggcctccttcgaccagcatcatcccaca
tcaggaccccttgatgattgccaatcactagccggtctgaccgttgaccagctcacacgt
gtgaacgtcatcaaggagaccgttcttggaacctccgaggtcaacgatctcctcacgttg
cttagcgccgctattaccaactacgagacgtgcctaggctcgtttcatgatgctaccgga
gagtcgcccgagaattttgttaaggaccaccatgatatcctcacacgtgtttcggacgga
ataaagctgattagcgtttctcttgccttgtccaaggaggcttggccgatagcatctgat
gcttcagtgacaaagccaccaccgaggattcttacggaggatgagaaaaagtcttcgtcg
ccagaagtttcgtatgtgaaggtgacgaaacgtgagagaatgatctatgagagctttaaa
gttttgggacgaaagcttcttcagtcttctcctggaggcaatggtggtctaaaggtggcc
aagacagtggtcgttaaccctaacggaatcaatggtgatgcctataaaaccattaatgac
gctatagctgctgcgccaacgaaggcagaatccgaaaacggatactttgtgatttacgtc
gtggctggagtttacgaagagtacgtcacggtccctagcaataaatcgtacgtgatgatc
gttggtgacggcattgacaaaacaatcatcaccggaaatagaaacgtcgttgatggttcc
accacttttgcttctgctacactggctgttatcggaagaggcttcatggcggcgaacata
accgtgagaaacacagccggccctactaaacaccaagctgttgctgtccgaaacagtgct
gacatgtcagcattttacaaatgtagcttcgagggctaccaagacacgctctatgtccac
tcacttagacaattttatagagaatgcgacatctacggaacggtagatttcatatttgga
aacgcagcaacggttcttcagaactgcaacatcattcctagactaccacttcaaggacag
ttcaacgccataacggctcaaggcaggagcgatccaaaccagaacaccgggatttcgata
cagaattgtagaataacaccgagtgctgaattggtttcaagtaatttctcggttaagacg
tatttaggccggccgtggaaggagtactcgaggacggtttacttgcaaaatttcatggat
gggtttattgatgctaagggatggaatgaatggatgggtgatttcgctttacagactttg
tattatgcggagttcaataataccggaccaggttcaggaacagctaaccgggttaattgg
cccggttatcatgtgatcaatgaaactgaagctgtttggttcactgtttcaaactttata
gtcggagactactggttgccgagcatgggagttccgtacgccggtggtttgatgtaa
DBGET
integrated database retrieval system
