Brassica napus (rape): 106399426
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Entry
106399426 CDS
T04128
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106399426
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106399426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
OCRE
Motif
Other DBs
NCBI-GeneID:
106399426
NCBI-ProteinID:
XP_013695361
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All DBs
Position
A6:complement(26921214..26927671)
Genome browser
AA seq
1324 aa
AA seq
DB search
MASASQYMMEEDQTDDEDFFDKLVDDSYSPSSQAQASSSSSAKQLTFDDGSDSDDVRAFS
NGSVGDVPDGDGTLNEAADPGNNVANEGSSEVDVVQTDANKLSDDVPLSETAKESSKVVN
ESGTHGVKEIDWGAFGVDSSVNDGRGFGSYSDFFTEFDGQLQGKAEVDVVAGGNDTNNTT
VVASAGFEQHQGEMVQDSTSGQYVDDNSQSWENMYPGWRYDANTGQWYQVDASINSQGSY
GNSANNWEGVASTDNSTSGVAGTAWNQASQVVNGYPEHMVFDAQYPGWYYDTIAQEWRSL
DSYNQASQTAGAGQAHDQQVQNGHSLTAMYHSNTESSMYNVNDTKQTFKGQEFGIQSQQG
SWDQSYYANNQQATNTWQSENGSQAEAAVTSASSPNFGGNQQVNNLYRTGSVAEQFKPNE
MGVQGFIPQHMNVASITQNGPLSFSNDFYNGQQQYVDDVQSFQSNQLFSPSAGRSPDGRP
PHALVNFGFGGKLIVVKDDNGSLQNSSFGSQKGTGGSYISLLNLAEVISGSASYSSPGDN
SLSYFSCLNQQSLPGPLVGGNVGSKDLHKWLDERIMNCESSVMDFSRGKLLKMLLSLLRI
SCQYYGKLRSPFGTDTTQKETDSAEAAVAKLFAFAKKDAVQNGYAPFSQCLQQLPPESQL
QATASEVQNLLASGRKMEALQCAQEGHLWGPALVIAAQLGQQFYGDTVKQMALRQLVPGS
PLRTLCLLVAGQPAEVFSTGSTSDLSFPGSPQQQAQFGSSSMLDNWEENLGVITANRTTD
DELVITHLGDCMWKERGEIIAAHICYLIADKNFDQYSDSARLCLVGGDHWKYPRTYASPE
AIQRTELYEYSKTLGNSQFILLPFQPYKVIYAHMLAEVGKLSAAQKYCQAVLKCLKTGRS
PEADTWKQCVSSLEERIRIHQQGGYTANLAPTKLVGRLLNLFDSTANRVVGGMPPPAPHS
TTGSLQAKEYHHQQQEATKLPYSQSVNTMSSLMPPASMESLHESGGTGRRTAVHTRSVSE
PDFGRTPIQDLADSPKEKVEGVTKLKSSGSVAGSRFSRFGFGMLKDTVGRVLQARSSSKE
AKLGAENQFYYDDKLKRWVEKGVEPPAEEAALPPPPKLGTYKNNSLGYENKSDMNPPSGS
WNSGGPTPAENSSGIPPVSQSSNQFSARGRMGVRARYVDTFNQGRGNSQTMFHSSSMPSP
KPPIPAKAKFFIPATPASSSNGHATEPAASETRQEENSADEVAASSGAPPQMTMQRFPSM
DNIQMNGLGISANGDHHPPPASRRTASWSGNFNTSFTSPTSPSTFKPVLLNGSSIVEELQ
EVEL
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcttctcaatacatgatggaggaggatcaaacggacgatgaggatttcttc
gacaaacttgttgatgattcctattctcccagcagccaagctcaggcttcttcatcttct
tctgctaagcagctgacgttcgacgacggtagtgactctgatgacgtcagagctttttct
aacggttctgttggtgatgttcctgatggagatggaacattgaatgaagcagcagatccg
gggaacaatgttgcaaacgaaggctcaagtgaagtagatgtcgtccagactgatgctaat
aagttaagtgatgatgtgccactgtctgaaacagctaaagaaagcagcaaggtagttaat
gagtccgggactcatggggttaaggagattgattggggtgcgtttggtgtggattcatcg
gtcaatgacggtcgtgggtttggttcttactctgatttcttcactgagtttgacggacag
ttgcaaggaaaggcggaggttgatgtggtcgctggaggaaacgatacgaacaacacaacc
gttgttgcctcggcaggtttcgagcaacatcagggtgaaatggttcaggattctacaagt
gggcagtacgtggatgataacagtcagtcttgggaaaatatgtatcctggatggagatat
gatgcaaatactggccaatggtatcaagttgatgcaagcattaattcacaggggagctac
ggaaactctgcaaataactgggaaggcgttgcttctactgataactcaacatctggagtg
gctggtacagcttggaaccaggcttcgcaagtggtcaatggatatccagaacacatggtc
tttgacgcgcagtatccagggtggtactatgacactattgctcaagaatggcgatctctg
gacagctacaaccaggcttctcaaacagctggagctggtcaagctcatgatcagcaagtt
cagaatggtcattctcttacagccatgtatcacagtaatactgagagtagcatgtataat
gttaatgatacaaaacagacattcaaaggccaagaatttggtatacagagccaacaagga
agctgggaccaatcttactatgccaacaatcaacaagctacaaacacatggcaatcagaa
aatggaagtcaggctgaggcggctgtaacttctgcctcgtcaccaaattttggaggaaac
cagcaagtaaataatttgtacaggacaggatccgtggctgaacagtttaagccaaatgag
atgggagttcaaggcttcatccctcagcatatgaatgtggctagtattacgcagaatgga
ccactgagtttctcaaacgatttctataatggacagcagcaatacgtagatgatgttcag
tcatttcagagcaatcagcttttctccccaagtgcaggaagatcacctgatgggcgtcca
ccacatgcacttgtcaattttggatttggaggaaagctcattgttgtgaaggatgataat
ggttcactccagaattcatcatttgggagtcagaaaggaactggtggaagctatatctct
ctcttaaacttggcagaagttattagtgggagtgcctcttattcaagtcctggggacaac
tcgttgagttacttcagttgtctgaatcaacaatctcttccaggtcccttggttggagga
aatgttggaagtaaagacttgcataagtggcttgatgagagaattatgaattgtgaatct
tccgttatggacttttcaagagggaaacttttaaagatgcttctttctttgctcagaata
tcttgtcagtattatgggaaactccggtccccttttggaactgatacaacgcaaaaggaa
acggattctgccgaggcagcagtcgctaaactttttgcatttgccaagaaagatgccgta
cagaatggttatgctccttttagccagtgcttgcagcaattaccacctgaatcacaactc
caagcaactgcgtcagaggtgcagaatcttctggcttctggtaggaaaatggaagctctc
caatgtgcacaagaaggtcatttgtggggaccagcacttgtcattgcggcacaacttggc
caacagttctatggtgacactgtcaaacaaatggcccttcgtcagctcgtacctgggtca
cctttacggacattgtgcctgctggttgcagggcaacccgctgaagtgttctccactgga
agtacaagcgatctcagctttcctggttcgcctcaacagcaagcccagtttggaagtagc
agcatgcttgacaattgggaagaaaatctgggtgtaataacggccaacaggaccacagat
gatgaacttgtgataactcatcttggagattgcatgtggaaagaaagaggcgagataatt
gcagcgcatatttgctatttgatcgcggataagaactttgatcaatactcagatagtgcc
agactttgtcttgtcggaggggaccactggaaatatcctcgaacatacgcaagtccagag
gctatccagagaacagagttgtatgaatactctaagacgctgggaaactctcagtttatc
ctgttaccgtttcaaccatataaagtcatatatgcccatatgctggctgaagttggtaaa
ctttcagctgcacagaagtactgtcaagcagtattaaaatgcctcaaaactggccgatct
cctgaagcggacacatggaaacagtgtgtttcgtcactggaagagagaatccgtatccac
caacagggtggatatactgcgaatttggccccaacaaagcttgttggaagactgctaaac
ctttttgatagcacggcaaatcgtgttgttgggggcatgccaccacctgcaccacattca
acaacaggaagccttcaggcaaaagagtatcatcatcaacagcaggaagccactaagtta
ccatatagtcaatcggtgaatacaatgtcatcactgatgccacccgcttcaatggaatcc
ttacatgagtccggtggtaccgggaggagaacggcagtccatactagaagtgtatcagag
ccagatttcggtagaacgccaatacaggatctagctgactcgccaaaagaaaaggttgaa
ggggtgacaaagttgaaatcatccgggagtgtggcaggttcccggtttagtagatttggt
tttggcatgctgaaggacacggtagggagggtcttacaagctcggtcatcatcgaaagag
gcaaaacttggcgcagaaaatcagttctactatgatgataaactaaagagatgggtggag
aaaggtgtggaacccccagctgaggaagctgcactgcctcctcctccaaaattaggaacg
tacaaaaacaactcactgggttatgaaaacaaatctgacatgaatccacctagtgggagc
tggaattccggcggcccaactccggcagagaattcttcgggaatcccaccagtctcacag
agttccaatcaattctcagctcgtggacgtatgggtgtgcgtgcaagatacgttgacacc
tttaatcaaggtcgtggaaactctcagaccatgtttcattcatcttccatgccatcccct
aaaccaccaatccctgcaaaagcaaaattcttcatcccagcaacacctgcatcgtcttca
aacggccatgcaacggaaccggctgcttctgagacaagacaggaggagaactctgcagat
gaagtagcagcatcttcaggggctccaccacaaatgacgatgcagagatttccaagtatg
gacaacatccaaatgaatggattgggaataagcgccaatggggatcatcatcctcctcct
gcttccagaagaacagcttcatggagcggaaacttcaacacctcgtttacgtctcctact
agtccatcaactttcaaaccagtcttactaaacggtagcagcatagtagaggagcttcag
gaagtggaactttaa
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