Brassica napus (rape): 106399708
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Entry
106399708 CDS
T04128
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106399708
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
106399708
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
106399708
NCBI-ProteinID:
XP_013695615
UniProt:
A0A816LKE5
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Position
C5:complement(53121104..53124811)
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AA seq
438 aa
AA seq
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MYQKTIILLTILSASLHFCSSSYPFDPRYDQSTSPDLYLETNHLHGHSTRNNHMKNRHGY
APASSPRAFNVKSFGAKANGNDDSQAFTKAWNAACSSTGTVYVVVPKNRAYTLKSVKFSG
PCKSSLIVFKIYGKIEAWKDPSAYEERRLWIVFEAVNNLRVEGGGRIDGNGNKWWPNSCK
INPNLPCLGAPTAVTFVECKNLMVSNIRLENAQQMHMTFQDCENVKALNLMVTSPGNSPN
TDGIHVTGTRNILIQDSIIRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGANNSEA
YVSNVVVNKATLIGTTNGVRIKTWQGGHGVAKNIIFQDIIMKNVTNPIIINQDYCDRVES
CPQQKSAVQVSNVLYKNIQGTSSRPVAVKFECSRSIPCQGISMQNVKLVDQTQQDVVSTA
SCSNVKLDTKGHVSPICT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaaagaccataatcttattaacaattctctcagcgtctcttcatttctgttcc
agcagctacccatttgatcctagatatgatcagtccacgtctcccgatttgtatcttgaa
accaatcatctacatggtcacagtacacgtaacaaccacatgaaaaatcgccatggatat
gctcctgcatcctctcctcgagcttttaacgtcaaatctttcggtgctaaagccaacgga
aacgacgattctcaggcattcacgaaagcttggaacgcagcttgttcatcaaccgggaca
gtttacgtcgtggttccgaaaaatagagcttacactcttaagtcggtcaaattctccggt
ccatgcaaatcatcattgattgtttttaagatttacggaaagattgaggcatggaaagat
ccatcagcctacgaggaacgtaggctctggattgtttttgaagctgtaaataaccttcgt
gttgaaggcggtggacgcatcgacggtaatggaaataaatggtggccaaattcttgcaag
atcaatcctaatcttccatgcctgggtgctccaacggcggttacgtttgtggagtgcaag
aacttgatggtaagtaacattaggttggaaaacgcacagcaaatgcatatgacgtttcag
gattgcgaaaacgtaaaggctttgaatcttatggtcacctccccgggtaatagtcctaac
actgatgggattcacgttactggaactcgcaatatcctcattcaagattctatcatccgt
actggtgatgattgtatatcgatagtgagtgggtcggagaatgtgagagcgacgggcatc
acatgcggaccaggtcatggaatcagcattgggagtttgggagcaaataactcagaagca
tatgtttcaaatgtggtggtcaacaaagcgactcttataggaaccactaatggtgtgaga
atcaagacttggcagggaggacatggagtggcaaaaaatatcatattccaagacatcata
atgaaaaacgtcacgaacccaataatcatcaaccaggactattgtgatcgtgttgaatca
tgtccccaacagaaatctgcggtgcaagtaagcaatgtgttgtacaaaaacatacaaggg
acgagctcaagacccgtagctgttaaatttgagtgcagcagaagcatcccatgtcaaggc
atttcaatgcaaaacgttaaactggtcgaccaaactcaacaagatgtcgtctccacagct
tcatgctccaacgtgaagttggacaccaaaggacacgtttctcctatttgtacttga
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