Brassica napus (rape): 106399800
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Entry
106399800 CDS
T04128
Name
(RefSeq) DNA mismatch repair protein PMS1-like isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
bna
Brassica napus (rape)
Pathway
bna03430
Mismatch repair
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106399800
03460 Fanconi anemia pathway
106399800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106399800
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
106399800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
106399800
NCBI-ProteinID:
XP_013695711
LinkDB
All DBs
AA seq
917 aa
AA seq
DB search
MQGDSSPLIRPINRAVVHRICSGQVILDLSSAIKELVENSLDAGATSIEINLRDYGEDYF
QVIDNGCGISPSNFKVLALKHHTSKLEDFTDLQSLTTFGFRGEALSSLCALGNLTVETRT
NKEQVATLLTFDRSGLLVAEKKTARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKLVS
LLNAYALIGKGVRFVCSNTTEKTPKSVVLSTQGKGSLKDNIITVFGMSTFTSLQPVSICI
SDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKGTSSRKYPVAIL
DFLLPGGACDLNVTPDKRKVFFSDETSVMASLKEGLNEIYSSSNASYTVNRLEDNSVRPD
KAGVSSLQEKSNLLSKGIVLDVSSKTRDGKAIEKEISSSREAELDNSSTLKVFKFDIKTR
GTKQGKGSLSVHDESLSVTHLNKADSKGLPDVNVIEKVTDGSKDLNNRASFAQSTLNTFV
TVGKRKHESISTLLSETPVLRNPPPGCRVEKGKFEVRALSARCTMEGDQVGGMAVSKQDV
TPNEVDSEIANLTSPTTHTDNVERHKREHEKPLCFEEPTSENTRTEGDTERILENDPHCS
QSLRPVATVLGSSAHSAGPKMFSTLKFSFQNLRKRRLERLSRLQSTGYVSKSLNTPRPKN
YRCFAAATLELSQPDDEERKARALAAATSELERLFRKEDFRKMQVLGQFNLGFIIAKLDR
DLFIVDQHAADEKFNFEHLARSTVMNQQPLLQPLTLELSAEEEVTILMHMDVIRENGFLL
DENPSAPPGRHFRLRAVPYSKKITFGVEDLKDLISTLGDNHGECSVISSYRTSKTDSVCP
SRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLADLESPWNCPHGRPTMRHLVDLTSLL
TLPDDDNDDDGVAISLS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggagattcgtctccgttgataagacccatcaacagagccgtcgttcaccgaatc
tgctccgggcaagtcatcttggacctctcctccgccatcaaggagcttgtggagaacagt
ctcgacgccggagccaccagcatagaaatcaacctccgtgactacggcgaagactacttc
caagtcatcgacaacggctgcggcatttccccatccaatttcaaggttctcgcgcttaag
caccacacttcgaagttggaggatttcacagatcttcagagtttgactacgtttggtttc
agaggagaagctcttagctctctatgtgccttggggaatctcacggtggagacgagaaca
aataaggagcaagttgctacgctcttgacctttgatcgttccggtttgttggttgctgag
aagaagactgcacgccaaattggtaccactgtcactgtgaggaagttgttctctaattta
cctgttcgaagcaaagagtttaaacgcaatatacgcaaagagtatgggaagcttgtttct
ttattgaatgcatatgcacttattgggaaaggagtgcggtttgtctgctctaacacgact
gagaaaaccccaaagtctgttgttctgagcacacaagggaagggttcacttaaagataat
atcataacagtatttggcatgagcacctttacaagtctacagcctgtaagtatatgtata
tcagatgactgtagagtcgaagggtttctttccaagcctggacaaggtactggacgcaac
ttggcggatcgacagtatttctttataaatggtcgacctgtagatatgccgaaagtcagc
aagttggtgaatgagctttacaaaggtacaagttctcggaaatacccagttgccattctt
gattttcttttacctggtggggcatgtgatttgaatgtcacgcccgataaaagaaaggtc
ttcttttccgacgagacttctgttatggcttctctgaaggaaggtctgaacgagatatat
tcctctagtaatgcgtcttatacagttaataggctcgaggataattccgtgcgaccagat
aaggctggagtttcatctcttcaggagaaatcaaatctcctttcaaaagggatcgtgctg
gatgtcagttctaaaaccagagatgggaaagctattgaaaaggaaatatcttcctcgagg
gaggctgagctggataatagttcaacactgaaggttttcaaatttgacattaagacacgt
gggactaagcaagggaaaggttctttatcagtccatgatgagtccctatctgtaactcac
cttaacaaggcagatagcaaaggtttgcctgacgtcaatgtgattgagaaagttacggat
ggaagtaaagacttaaacaatcgcgctagctttgcacagtcaactctgaatacttttgtt
actgtgggaaaaagaaagcatgaaagcataagcaccctcctctctgaaacacctgtccta
agaaacccccctcctggttgtcgtgtggagaaaggcaaatttgaagtccgtgctttgtct
gcaagatgtacaatggaaggtgatcaagttggtggtatggccgtctcgaagcaagatgtg
acgccaaatgaggtggactctgaaatagcaaatttgacatctcctacaacccatactgac
aatgtagaaagacacaaaagagagcacgagaaaccattatgttttgaagaaccaacatca
gaaaacacacgcaccgagggagatacggaaaggattttggagaacgatccacattgcagt
cagtcactgcgacctgttgccacagtgctgggctcctcagctcattcagccggtccaaaa
atgttttcaacattaaaatttagtttccaaaacctaaggaagaggaggttagaaaggctg
tcaagattacagtccacaggttatgtatctaaaagtttgaacacgccacggcctaaaaat
tacaggtgctttgccgctgcaacattagagttatctcaaccggatgatgaggagcgaaaa
gcaagagctttagctgcagctacttccgagctggaaaggcttttccgaaaagaagatttc
agaaaaatgcaggtactcggacaattcaatcttggttttatcattgcaaaattggatcga
gatctgttcattgtggatcagcatgctgccgatgagaaattcaacttcgaacacttagca
agatcaactgtcatgaaccagcaacccttactccagcctttgactttggagctctctgca
gaagaagaagttacaatattaatgcacatggatgtaatcagggagaacgggtttcttctt
gatgagaatccgagtgctcctccaggacgacacttcagactgagagcggttccttatagc
aagaaaatcactttcggggtcgaagatcttaaagacctaatatcaactcttggagataac
cacggagaatgttcggttataagtagttacagaaccagcaaaacagattcggtttgtcca
tcaagagtccgtgcaatgctagcatcaagagcatgcagatcgtctgtgatgatcggagat
ccactcagaaaaaacgaaatgcagaagatagtagaacacttggcagatctggaatctcct
tggaactgtccgcacggacgaccaacgatgcgtcatcttgtcgatttgacaagtttgctc
acattacctgacgacgacaatgatgatgatggtgtagccatttcattgtcatga
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