Brassica napus (rape): 106400207
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Entry
106400207 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106400207
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106400207
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106400207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
106400207
NCBI-ProteinID:
XP_013696046
UniProt:
A0A816QG67
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All DBs
Position
C6:complement(29976042..29979367)
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AA seq
806 aa
AA seq
DB search
MDDSCAVCADSLEWVAYGSCGHREVCSTCVVRLRFVLCDPRCCICKTESPVIFVTKALGD
YTRTINDFSTFPTAPKEGRVAGGFWYHEDTQAFFDDLDQYRMIKAMCRLSCSVCDKAEEE
QGGGGGGGGPRHRLRIKSVEQLKGHLYHKHKLNMCNLCLEGRKIFIGEQKLYTRAQLNQH
IHTGDSEVDGSESERGGFAGHPMCEFCRNPFYGDNELYTHMTTEHYTCHICQRSQTGKYE
YYKNYDDLELHFRRDHFLCEDDSCLSKKFIVFPNESELKRHNAIEHGGRMSRAQRTAALQ
IPTSFRYSRGNDQESRRGRPRSFRREPGGGDDNYNRAVNAALRLSEAEYSRQEPPPPSSA
PPPGFSENNNRDMDDGDPLIQPMESLSTTDMEPSSRYLQAVGSSGGGGSRLQESAFPPLA
GQPRSGQNLDGLPTNTLAARLRRQTNRTPSATAIASPSQAWPAVNRASNTSGSGGGNPSS
GWPAIGRAPAPVQASSSSAQSRSHARVAQPRPPNSQAARNGNMIPHSSSAPNLSDTRSLH
SEFPPVSAAARKTPSSTITQGTSNSHPPPPDVQSANKSLVEQMRSALGHDEELFMTFKDV
SGQYRQGSIDATTYLEYVKGYGLSHLVIDLARLCPDPRRQKELIDAHTASLRNDAAKENG
PAAAAGQSSSSQAQESKKNKGKAVKVADPKEAVADNFMETVRRLQFSQNFHEEEEEVISK
DKNAYRSDKGKSKVESTSTGSKQQRKKTSKFHRVRLGDGSMAALLNVNSSYHEPHEPESK
DDNNNNSQNQTGVRGVWRKGGAQLFS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgtgccgtctgcgccgacagtctcgaatgggttgcctacggatcttgt
ggccaccgagaagtctgctccacatgcgtcgttcgtctccgtttcgtcctctgcgatcct
cgctgctgcatctgcaaaaccgagtctcccgtcatcttcgtcaccaaggcgttgggtgat
tatacgaggacgatcaatgacttctcgacgttcccgacggcgccgaaggaaggtcgagta
gcgggagggttctggtaccatgaagacactcaggccttctttgatgatttggatcagtac
aggatgatcaaggccatgtgtaggctctcctgcagtgtttgcgacaaggcggaggaggag
caaggaggaggaggaggaggaggagggccaaggcatcgtttgaggattaagagcgttgag
cagctcaagggtcatttgtatcataagcacaaattgaatatgtgtaatttatgtctcgaa
gggcgtaagatattcataggggagcagaagttgtatacgagggctcagcttaaccaacac
atacacactggtgactctgaagttgatggaagtgagagtgaaagaggaggctttgctgga
catcccatgtgtgagttctgtaggaatcctttctatggtgataatgagttgtatactcac
atgactactgagcattatacctgtcacatttgccaaaggtcgcaaacagggaaatatgaa
tactataaaaactatgatgacttggagcttcactttcgtcgagaccatttcctttgtgag
gacgactcctgcctttcaaagaagttcattgttttcccaaacgaatcagagttgaaaagg
cataacgcgatagagcatgggggtaggatgtctcgtgctcagcgaactgctgcgttacag
ataccaacgagtttccgatacagtcgtggaaatgaccaagaaagtcgtcgtggaagacct
cgatcattccgtcgcgaacctggtggtggcgatgataattataatcgtgcagtcaatgct
gctcttcgtttatctgaggctgagtattctaggcaagagcctcctccaccttcaagtgcg
cccccacctggattctctgagaacaacaacagagacatggatgatggtgatcctcttatc
caaccaatggaatctctttcaactaccgatatggagccctcttcgcgatatcttcaagct
gtgggcagttctggtggtggtggttcacgtctgcaagaatctgcttttcctcctcttgct
ggtcaacctagatctggacagaacttggacggtttgcctactaacaccttggctgctcgt
ctaagacgtcaaacaaatcgaactcctagcgctactgccattgctagtccttctcaagca
tggccagcggttaaccgagcttccaatacaagtggcagtggcggtggcaacccttcttcc
ggatggccagcaataggtcgcgcacctgcacctgtacaagcatctagctcttcagctcaa
tctaggtcccatgccagagttgctcagcccagaccacctaattcacaggctgctcgtaat
ggaaatatgattcctcactcatcctcagctcctaatctatctgatacaagatcacttcat
tcagaatttcctcctgtttctgctgctgctcgcaagacaccatcatccaccatcacacag
ggaacatcaaactcccatccaccacccccagatgtgcaatctgctaacaagtcattggtt
gagcaaatgcgatctgcacttggtcatgatgaagaattgtttatgaccttcaaagatgta
tcaggacagtatcgtcaaggttcgattgatgcaacaacttacttggagtatgtgaaaggt
tatggattgtctcacttggttattgaccttgcaagactctgccctgaccctagaaggcag
aaggaactcattgatgctcacactgccagtttgagaaacgatgcagcaaaggagaatggt
ccagctgctgctgcagggcagagttcgtcgtctcaagctcaagagagtaagaaaaacaaa
gggaaagctgtgaaggttgctgatccaaaagaagcagtagcagataactttatggagaca
gtgaggagactacaattctcgcagaattttcatgaagaagaagaagaggttatatcgaaa
gataagaatgcttacaggtctgacaaaggcaaatcgaaagtggagtctacttcaaccgga
agtaagcagcaacgtaagaaaacctcaaagtttcacagagtacggcttggtgacggatca
atggcagcattgctaaatgtgaactcttcttaccatgagcctcatgaaccagaatcaaaa
gatgacaataacaataatagccagaatcaaaccggtgtacgtggtgtttggcgtaaagga
ggtgcacaacttttctcctag
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