Brassica napus (rape): 106400371
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Entry
106400371 CDS
T04128
Name
(RefSeq) protein GIGANTEA
KO
K12124
GIGANTEA
Organism
bna
Brassica napus (rape)
Pathway
bna04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
106400371
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NCBI-GeneID:
106400371
NCBI-ProteinID:
XP_048614746
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Position
C5:14584371..14589921
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AA seq
1170 aa
AA seq
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MTSPTSSERWTDGLQFSSLLWSPPRDPQQHKDQVVAYVEYFGQFTSEQFPDDIAELVRNQ
YPSTEKRLLDDVLAMFVLHHPEHGHAVILPIISCLIDGTLVYSKEAHPFASFISLVSPTS
ENDYSEQWALACGEILRILTHYNRPIYKTEQQNGETESKASTSGSPTLSETKAVSPGQHE
RKPLRPLSPWISDILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTIATRGSGKHPQYMP
STPRWAVANGAGVILSVCDDEVARYETATLTAVAVPALLLPPPTTSLDEHLVAGLPALEP
YARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGVRLPR
NWMHLHFLRAIGIAMSMRAGVAADAAAALLFRILSQPALLFPPLSQAEGVEIKHAPIGGY
GSNYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLNSSAVDLP
EIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVETILSRTFPPETSI
KKARASLATRSSATKNLAMAELRAMVHALFLESCAGVEIASRLLFVVLTVCVSHEAQSSG
SKRRRSEEDATAEENQDNQTSNRKSRNVKGQGPVAAFDSYVLAAVCALACEVQLYPMISG
GGNFSNSAVAATITKSVKINGSSNEYGAGVDSAIKHTRRILAILEALFSLKPSSVGTPWS
YSSSEIVAAAMVAAHISELFRRSKALTHALSGLMRCKWDKEIHKRASSLYNLIDVHSKVV
ASIVDKAEPLEAYLKNAPVQKDSLACLNWKQQNTSSAGGFGTAAVTSTSRNEMAPRGGNH
KYARHSDEGSGSRSSSEKGIKDLLLDASDLANFLTADRLAGFYRGTQVLLRSILAEKPEL
SFSVVSLLWHKLIASPEIQPTAESTSAQQGWRQVVDALCNVVSATPAKAAAAVVLQAERE
LQPWIAKDDEEGQKMWKINQRIVKVMVELMRNHDRPESLVILASASDLLLRATDGMLVDG
EACTLPQLELLEATARAIQPVLAWGPSGLAVVDGLSNLLKCRLPATIRCLSHPSAHVRAL
STSVLRDIMNQSGITTSKATPKPPPTITTEKNGTDSPSYRFFNAAAIDWKADIQKCLNWE
AHSLLSTTMPTQFLDTAAGELGCTISMSSQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgcctacttcatctgagaggtggaccgatggtcttcagttctcttccttgtta
tggtctcccccacgagatcctcaacaacataaggatcaagtcgttgcttatgtcgaatac
tttggtcagttcacatcagagcaattccctgatgatattgctgagttggtccgtaatcag
tatccgtcaactgagaagcgccttttggatgatgtgttggctatgtttgtcctccatcat
cctgagcatggtcatgcggtcatccttccgattatctcatgtctcatcgatggcacccta
gtgtacagcaaggaagctcatcccttcgcctctttcatttctttagtttccccaaccagt
gagaatgactattcagagcaatgggctttggcgtgcggagaaatcctccgcattttgact
cattacaaccgtcccatatacaagacggagcagcaaaatggagaaacggagagcaaagct
tcaactagtgggtctcctacgctttcagagactaaggctgtatcgccaggacagcatgaa
aggaaaccgctaaggcctttgtctccatggatcagtgatatactactcgctgctcccctt
ggtatcagaagtgactactttcgttggtgtagtggtgttatgggtaaatacgctgctgga
gagctcaagccacctaccattgctactcgaggatctggtaaacatcctcaatatatgcct
tccacgccaagatgggcggttgctaatggagctggtgtcatactgagtgtttgtgatgac
gaagttgctcggtatgagactgctacgttaacagccgttgctgtccctgcacttctcctt
cctcccccaacgacatccttagatgagcatttagttgctggccttccagctcttgagcca
tatgctcgtttgtttcacagatattatgcgattgcaactccaagtgctactcagagactt
cttcttggactcttggaagcacctccgtcttgggctccagatgcacttgatgctgctgta
cagcttgtggagctccttcgagctgctgaagattatgcatctggtgtaaggctaccaagg
aactggatgcatttgcacttcttgcgtgcaataggaatcgccatgtctatgagagcaggc
gttgctgctgacgctgcagccgctttgcttttccgcatactctcgcagccagcactgctt
tttcctccgctaagccaagctgagggagtagaaatcaaacacgcccctattggtggctac
ggttcaaattacagaaagcagatagaagttcctgcagcagaagcaaccattgaagccact
gctcaaggaatagcctcaatgctttgcgctcacggtcctgaagtggagtggaggatctgc
actatatgggaagctgcctatggattgatccctttaaactcctcagccgttgatctccct
gagatcattgtcgccaccccactgcaacctcccatcttgtcatggaacctatacatccca
ctcctcaaagtactcgagtatcttccacgtgggagtccttccgaagcatgcttgatgaag
atattcgtcgccacggtggaaacaatcctcagcagaactttcccgccagagacttctata
aagaaagctagagcgagtttagccacgagatcatcagcgaccaaaaacctcgctatggct
gagcttcgtgctatggtccatgctctcttcttggaatcatgcgctggcgtggagatagct
tcgcgcctgcttttcgttgtgttgactgtttgtgttagccatgaagcgcagtctagtggg
agcaagagacggagaagcgaagaagatgctactgcagaggagaatcaagacaatcaaact
agtaaccgtaaaagtaggaacgtcaagggacaaggacctgtggcggcgtttgattcgtac
gttctcgctgctgtttgtgctcttgcctgtgaggttcagctgtatcctatgatctctgga
ggagggaacttctccaactccgcagtggctgcaaccattacaaagtctgtgaagataaac
ggttcatctaacgagtacggagctggggttgactctgcaatcaagcatacacgccgcatc
ttagcgattctcgaggcgctcttttcgttgaaaccatcttctgtggggactccgtggagt
tacagctctagcgagatagttgctgcggccatggtcgcagctcacatctccgagctcttc
agacgctcaaaggccttgacgcatgcgctgtccgggttgatgagatgcaaatgggacaag
gagattcataaaagagcgtcgtctttgtacaacctcatcgacgttcacagcaaagttgta
gcatccatcgtcgacaaagctgagcccttagaagcgtaccttaagaacgcaccggtccag
aaggattcgctggcttgtcttaactggaaacaacagaacacatcatcagcaggagggttt
ggcacagcagcggtgacgtccacgtcacgcaatgaaatggctccgagaggaggtaaccat
aagtatgctaggcattcggatgaaggctcagggagtagatcatcatcagagaagggtatc
aaagatctgctgttggatgcttctgatctagcgaatttcctcacggctgataggctagca
gggttttaccgtggtacgcaagttcttttgaggtcgatacttgctgagaaaccggagctt
tctttctccgttgtttcgctgttgtggcacaaactgatcgcttctcctgagatccagccc
acagccgaaagcacctctgctcaacaaggatggagacaggtagttgatgcactatgcaat
gttgtatccgcaacgccagcaaaagcagctgcagccgttgttcttcaggctgagagagag
ttgcagccttggatagcgaaagatgatgaagaaggccagaagatgtggaaaataaaccaa
aggatagtgaaagtgatggtggaactcatgagaaatcatgacaggcctgagtcactggtg
attctggcaagtgcatctgatctccttctgagagcaactgatggaatgcttgttgatgga
gaagcttgtacattacctcaacttgagctacttgaagctacagcaagagcaatacagcca
gtgttagcttgggggccatctggactagcagtagttgacggcttatctaatctattgaag
tgtcgtctgccggcaacaatacggtgcctatcacacccaagtgcacacgtacgtgccttg
agcacatcagtactacgagacatcatgaaccaaagcggcataaccaccagcaaggcaact
ccaaaaccaccgccaacaataacaacagagaagaatggaacggacagcccgtcgtacagg
ttcttcaacgcggcggcaatagactggaaagcggacatacaaaagtgtttgaactgggaa
gcgcacagcttgctgtcgacgacaatgccaactcagtttcttgacacggcggctggggaa
ttaggatgtaccatatcaatgtcgtcccaataa
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