Brassica napus (rape): 106400528
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Entry
106400528 CDS
T04128
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X2
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106400528
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106400528
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
106400528
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Structural polysaccharide
106400528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
106400528
NCBI-ProteinID:
XP_013696335
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All DBs
Position
A6:complement(26814125..26817199)
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AA seq
634 aa
AA seq
DB search
MVTFRNLVLFLLLLTVAAPILLYTDPSASFTTTPSSKRDFLDEVTALSFNSDGNHLNLLP
RESPAVVRRDVVGVVYSTQDSDSSRRQETRGDQFSARVLSATDDETQSQTVNPIQQVTDA
ASKVVDKPSDMHVSADTSQARERMHVQLIQKATEKVDEQEPKDSGAEKERGNVVMPDAQV
RHLKDQLIRAKVYLSLPAAKANPHFVRELRLRVKEVQRVVLDASKDSDLPKNAVEKLKAM
EQTLAKGKQIQDDCSTVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTIPKGLHCLPLR
LTSDYYALNSSEQQFPNQEKLEDNQLYHYALFSDNVLAASVVVNSTVTNAKHPSKHVFHI
VTDRLNYAAMRMWFLNNPPGKATIQVQNVEEFTWLNSSYSPVLKQLSSRSMIDYYFRAHH
TNSDANLKFRNPKYLSILNHLRFYLPEIFPKLSKVLFLDDDIVVQKDLSGLWSVDLKGNV
NGAVETCGESFHRFDRYLNFSNPLISKNFDPRACGWAYGMNVFDLDEWKRQNITEVYHRW
QNLNQDRELWKLGTLPPGLITFWKRTYPLERRWHVLGLGYNPSVNQRDIERAAVVHYNGN
LKPWLEIGLPKYRGIWSKHVDYQHVYLRECNINP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgttccgaaacctcgttctcttcttattgctcctcaccgtcgctgctcctatc
cttctctacaccgatccctccgcctccttcacgaccaccccatcttctaaacgcgatttt
ctcgatgaagtaactgctttgagtttcaattccgatggaaaccatttgaatctgcttcca
agggaatctccggcggtggtgagaagagacgtcgtgggtgtagtctattccacgcaagac
tctgattcttcgcggaggcaagaaacgaggggggaccagttctctgctcgtgttctttcg
gccaccgacgatgaaactcagtctcaaactgtcaatcccatccaacaagtcactgatgca
gcttcaaaggtggtggataagccaagtgatatgcacgtttctgctgacacctcccaggct
agggaaaggatgcatgttcagttaattcagaaagccactgaaaaggttgatgagcaagag
cctaaagattctggagctgagaaagagagaggaaatgtggtgatgcctgatgctcaggtg
aggcatcttaaagatcagctgattagggcaaaggtttatctttcacttccagctgccaag
gctaatccccattttgtgagagagcttcgtctccgtgttaaagaagttcaacgggttgtc
ttagatgcctccaaggattccgatctcccaaagaatgctgtagaaaagttgaaagcaatg
gagcaaacgttggccaaaggcaagcagatccaagatgactgttccacggtggtgaagaag
ctacgtgcaatgctccactcggcagaggagcagctacgagtccataagaagcaaaccatg
ttcttgacgcaattgactgccaagacgattccaaagggccttcactgccttcctctacgc
ctcactagcgattattatgctttgaattcgtctgaacaacaattcccgaatcaggagaaa
ctagaagataatcagctttatcactatgccctcttctctgataacgttttggctgcatca
gttgttgttaactctaccgttaccaatgcgaagcatccctcaaagcatgtcttccacatc
gtcacggacagactcaactatgcggcaatgaggatgtggtttctaaacaacccaccaggc
aaagccaccatccaggttcagaacgttgaagagtttacatggctgaactcaagctacagt
cctgttctcaaacagcttagttctcgatcgatgatagactactacttcagggcacaccat
acaaattcagatgccaacttgaagttccggaatccaaaatacttatccatccttaatcat
cttcgcttttacttgcctgagatctttccaaagctcagcaaggtgctcttcttggatgat
gatatagttgtgcagaaggacctgtctggtctttggtcagttgatctgaagggtaatgtc
aacggtgctgttgagacttgtggggaaagcttccatcgctttgaccgatacctgaacttc
tcaaatccactcatctccaagaattttgaccctcgtgcttgtggatgggcgtatggtatg
aatgtttttgaccttgacgaatggaagaggcaaaacatcacagaggtctaccatcgatgg
cagaatctgaatcaagaccgagaattatggaagctaggtacactaccgcctggtctcatc
acgttttggaaacgaacatacccgctagaacggagatggcacgtgctgggacttggatac
aacccaagtgtgaaccagagggatattgagagggcagccgtcgtacattataacggtaac
ctcaaaccatggctagagattgggcttccaaaatatcgaggcatctggtcaaagcacgtc
gactatcagcacgtttatctcagagaatgcaacatcaatccttag
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