Brassica napus (rape): 106400887
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Entry
106400887 CDS
T04128
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NOP2A-like isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106400887
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106400887
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106400887
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
106400887
NCBI-ProteinID:
XP_048598819
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All DBs
Position
A10:complement(10281980..10286320)
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AA seq
688 aa
AA seq
DB search
MVLTRSKKRVAKSQTPPLKRAEKPQALALKRKAEKPQALALKKGGAKSQKTPPLKKQKKE
VVVEEDPSEDDDEEVSDDAAASTDVESDDGEEEGLGSSGFFSDDDGEENDDDGEELLGDD
FLEGSGDEEEHSDSGSGSDSDSDEGDIEKESKLIDEEEAKEEEDAKAELLDFNKEAGDDA
FRLPTEEELEEEARGPPDLPLLQSRIKEIVRALSNFSVLRPNGASRKDCVEQLKSDIASY
YGYNSFLIGALFELFPPVELMELVEAFEKQRPTSIRTNTLKTRRRDLADVLLNRGVNLDP
LSKWSKVGLVVYDSQVPIGATPEYLSGFYMLQGASSFLPVMALAPQENERIVDVAAAPGG
KTTYVAALMKNTGLIFANEMKVPRLKSLTANLHRMGVTNTIVCNYDGRELPKVLGEKSVD
RVLLDAPCSGTGVISKDESVKVSKSLEEIKKFAHLQKQLLLAAIDMVDATSKTGGFIVYS
TCSLMVAEVSVLICSRPCLSPLCLYASSYFFMLHENKIAQNEAVIDYALKKRSVQLVKTG
LDFGQDGFVRFREHRFHPSLNKTKRFYPHVHNMDGFFVAKLKKMSNMKQASEDDDEALGT
VDEADVPSDDDEAEAMEEMEKPKKTKESKEGLAKSKESKKGKKSKSKKGEDPPKIKKQRK
NRTEMRMEISQAREEKRKAMREKSKEKQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggttctcactcgtagcaagaagagggtggcgaaatctcaaacccctccgttgaagaga
gcggagaagccccaagccctggcgttgaagaggaaggcggagaagccccaagctctggcg
ttgaagaagggaggagccaagtcccagaagacacctccgctgaagaagcagaagaaggaa
gtcgtcgtggaggaagatcctagcgaagacgacgacgaagaagtttccgatgatgcagca
gcctctaccgatgtagaatctgatgatggagaggaagaagggttaggctcttccgggttt
ttctccgatgacgatggagaagagaacgacgacgacggtgaggagctcttgggtgatgac
tttctggaaggtagcggcgatgaagaggagcattcggattcgggttcgggttcggattct
gactccgacgaaggcgatattgagaaggagtctaaacttattgatgaggaagaagcaaag
gaggaggaagacgctaaggctgagctccttgatttcaacaaggaagctggagacgatgcg
tttcggttaccaactgaagaggaacttgaagaagaggctcgtgggccaccagatctacct
ctacttcaaagtagaattaaagagattgttagagctctgtcaaactttagcgtcttgagg
ccaaatggagccagcaggaaagattgtgttgaacagctcaaatctgatattgcttcttat
tatggctacaacagttttcttattggagctttgtttgagctgtttcctcctgttgaactt
atggaattagttgaagcctttgaaaagcaaaggcctacatctatccggacaaacacactt
aagactcgaagaagggatcttgctgatgtgcttctgaacagaggagtcaatcttgaccca
ctaagcaagtggtcaaaagtcggacttgttgtttatgattcacaagtgccaatcggtgca
acccctgagtatttgtctggattctacatgcttcaaggtgctagttcgtttttgccagtg
atggcccttgcccctcaagagaatgagcgtattgtggatgtagctgctgctcctggtggt
aaaactacatacgttgctgctctaatgaaaaataccggcttgatatttgcgaacgagatg
aaagtacctaggctcaagtcgttgactgccaatctgcaccgcatgggcgtcacaaatacc
atagtctgtaactatgatggaagagagctacccaaggtgttaggtgagaagtcggttgat
agagtactgttggatgcaccttgcagtggaactggggtcatttcgaaagatgaatcagtt
aaagtttccaaatctctggaggaaattaagaaatttgctcacttgcaaaagcaactttta
cttgctgctattgatatggtggatgccacttccaaaaccggtggatttattgtgtactca
acatgttcacttatggttgctgaggttagtgtcctgatatgttcccgcccatgtttgtct
cccttatgtctttatgcatcctcttatttttttatgttgcatgaaaacaaaattgcgcag
aacgaagctgtcatcgattatgctctcaaaaagaggagtgttcaactcgttaaaactgga
ctcgacttcggccaagacggatttgtaagatttagagaacatcgatttcatccatcttta
aacaagaccaaacgtttttatcctcatgtacacaacatggatggattctttgttgcaaag
ctaaagaaaatgagtaacatgaaacaagcttcagaagatgatgacgaggcgttaggaact
gtagatgaagctgatgtgcccagtgatgatgatgaagctgaggccatggaagagatggag
aaacccaagaaaactaaagaaagcaaggagggacttgcaaaatcaaaggagagcaaaaaa
ggcaagaaatcaaaatctaaaaaaggtgaggatccacctaaaataaagaagcaaaggaag
aacagaactgaaatgaggatggagatttctcaagctagggaagagaaaaggaaagcaatg
agagagaagtcgaaggagaagcaataa
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