Brassica napus (rape): 106400913
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Entry
106400913 CDS
T04128
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106400913
Enzymes [BR:
bna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
106400913
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106400913
Prokaryotic type
106400913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
106400913
NCBI-ProteinID:
XP_022558612
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All DBs
Position
C5:complement(3997731..4000968)
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AA seq
358 aa
AA seq
DB search
MSDPNTKHPPGDYTASQERLSKVARIDGFSDEEEGHESELSMSPENPRVQRYLVAIEYVG
TRFFGSQQQPKDRTVVGVLQEAFHKFIGQPVKICCSSRTDAGVHALSNVCHVDVERVSKR
KPGEVLPPHEPDVVQKAVNHFLQKNEGDVMVIDVRCVPSNYHARYKAKERTYFYRMLSGL
DPLSIFEKDRAWHVPEELDLPAMQEACRVLVGSHDFSSFRAAGCQAKSPVRSLDELSVTE
VPSTPYFPSLTESTWSNPNNGDPLTCSSQTKTETAGVTTNGEAFGIRRRHRCYVVTARSR
GFLYHQVRLIVAVLKCVGTGELTVLDVERILKAKDVSAGKPMAPASGLYLARVKYEFP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcctaatacgaagcatcctccaggagactatacagcttctcaagagaggcta
tcaaaggttgcgaggatagatggattcagtgatgaagaagaaggacatgagtctgagcta
tcgatgagcccagaaaaccctagagtgcagcgttacttggttgccattgagtatgtcgga
acgcgtttctttgggtcacaacagcagcctaaggaccgaaccgtcgtcggcgtattgcag
gaagcttttcataagtttattggccagccagttaagatctgctgctcaagtcgaacggat
gcaggagtgcatgcgctatcaaatgtttgccatgtagatgtagaacgagtcagtaaaaga
aagcctggtgaagtgttaccacctcatgaacctgatgtcgtccagaaagctgtgaaccat
ttcttacagaaaaatgaaggtgatgttatggtgattgatgttcggtgtgtcccaagtaat
taccatgccagatataaggccaaggagcgcacatacttctaccgcatgctatcggggctg
gatcctttatccatctttgaaaaagaccgtgcttggcatgttcctgaggagctagatctt
cccgctatgcaggaagcatgcagagttcttgttggatctcatgattttagctccttcagg
gcagctggttgccaggcaaagtcaccggtgagatctttagatgaactaagtgtcactgaa
gtaccatcaactccatattttccatctctcacggaaagtacttggagtaacccaaacaat
ggagatcctctcacatgttccagtcaaaccaagactgagactgctggtgttactacaaat
ggcgaagctttcggtataagaagacgacaccgctgctacgtcgtaacagcgcgttcccgc
gggtttctctaccaccaggttcgactgattgtagcagtactgaaatgcgtagggactgga
gaattgaccgtcttagacgtggaacggatcctgaaggccaaggatgtttctgcgggcaaa
cccatggctcctgcatctggtctgtaccttgcgcgagtcaaatatgaattcccatga
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