Brassica napus (rape): 106401031
Help
Entry
106401031 CDS
T04128
Name
(RefSeq) clathrin heavy chain 2-like
KO
K04646
clathrin heavy chain
Organism
bna
Brassica napus (rape)
Pathway
bna04142
Lysosome
bna04144
Endocytosis
bna05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106401031
04142 Lysosome
106401031
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106401031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106401031
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106401031
Membrane trafficking [BR:
bna04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
106401031
Exosome [BR:
bna04147
]
Exosomal proteins
Proteins found in most exosomes
106401031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
106401031
NCBI-ProteinID:
XP_013696903
LinkDB
All DBs
Position
C5:53077584..53087347
Genome browser
AA seq
1695 aa
AA seq
DB search
MAAPNAPITMKEVLTLPSVGINQQFITFTNVTMESDKYICVRETSPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDYLQMFNIEAKAKLKSHQMPDQVEFWKWI
TPKMLGLVTQNSVYHWSIEGDSEPVKMFDRATKLENNQIINYKCSPNEKWLVLIGIAPGP
PERPQLVKGNMQLFSVDQQQTQSLDAHAASFAQFKVPGNENPSTLISFATKSFNAGQITS
NVHVIELGALPGKASFTKKKADLSFLPDFADDFPVAMQISNKFSLIYVITKLGLLFVYDL
ETASPIYRNRISTDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGPLKNLEL
AVNLAKRGNLPGAEDLVVKRFKELFDQTKYKEAAELASESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNSYESLELSRLVVNQNKKNLLKNWLEEDKLECSEELGDLV
KTLDNDLALEIYIKAQTSPKVVAALAEKREFDNIIIYSEKVKYTPDYLFLLQTILRTDPQ
GAGEFAVKMSHMKGGCPLDINTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILAGSMFSHYDRPRVAQLCEKAGLYIQSLKHYSELNDIKRVIVNTHAI
EPQALVDFLGTLSSDWVMECMKELLIVNPRGNLQIIVQACKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYVRMSEDPEVHFKYIEASAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYINNMLRYIEGYAQKVNPGSAPLVVGQLLDDECPE
DFIKGLIISVRSLLPVEPLVEECEKRNRLRLLTHFLEHLVTEGSQDVHVHNALGKIIIDS
NNNPERFLTTNQYYDSRVVGKYCEKRDPTLAVVSYRRGQCDEELINVTNRSSLLKLQARY
VVERMDGDLWEMVLDENNEYRRQVIDQVVSTALPENKSPEQVSSAVKAFMTADLPHELIE
LLEKIVLQNSDFSGNINLQNLLILTAVKADTSRVMDYVNRLENFDGPVVGEMAVEAQLFE
EAFAIFKKFNLNVEAVNVLLDNIKSIERAAEFAFRVEEDSVWSQVAKAQLREGLVSDAIE
SFIRAEDATHFLEMIRVAEDANVYDDMVSYLLMVRNKVKEVKVDSELIYAYAKIDRLGEV
EDFILMPNVANLQIVGDRMYDEAMYEAAKIVYAFVSNWGKLAVTLVKLQQFQGAVDAARK
ASSAKTWKEVCFACVDAEEFRLGQICGLNIIIQVDDLEEVSDFYQKKGFFSELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLIEHIKLFSTRLNIPKLIRACDEQQQWQELTYLYI
QYAEFDNAATTVMNHSPEAWEHVQFKDIVGKVANVEVYYKAVHFYLLEHPDMINDLLNVL
ALRLDHTRVVDIMRKAGQLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYERLRESIDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGKWKQSIALSKKDNLYKDCMETASQSGD
HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWMNNMVDFAYPYLLQVMREY
TGKVDEIIKDKLEAQKEAKAKEQEEKEVVSQQNMYAQLLPNALPAPPMQLALTAPQPMGG
MPLMPPFGMPPMGGY
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacctaacgcccccatcacgatgaaggaggtcctgacgcttcctagcgttggg
ataaatcagcaattcatcacgtttacaaatgttacaatggagtctgacaagtatatatgc
gtgcgagagacgtcaccacaaaacagtgttgtgattattgatatgaatatgcccatgcag
cctcttagaaggcctatcactgcagattctgctcttatgaacccaaactcaagaatcctt
gcattaaaagctcaagttccaggaactactcaggattatctacagatgtttaacattgaa
gcaaaagcaaagctgaaatcacatcagatgcctgaccaggttgagttttggaagtggatt
acacccaagatgttggggctggtcacacaaaactcagtgtatcactggtccattgaaggt
gattctgagccagtgaagatgtttgatagagcgaccaagttggaaaacaatcaaattatt
aactacaagtgctctcctaatgagaagtggttggtcttaattggaatcgctcctggtcct
cctgagagaccacaattggtaaaaggaaacatgcagctattttctgtggatcaacagcag
acccagtcccttgacgcacacgctgcatcatttgctcagtttaaggtccctgggaatgag
aatccttctacccttatatcctttgcaaccaagagctttaatgctgggcagataacatca
aatgtgcatgtcattgagcttggtgccctacccggaaaggcatcatttacaaaaaagaag
gcagatctctcttttctcccagattttgctgatgattttcctgttgccatgcagatctct
aacaagtttagcttgatatatgtcatcaccaagcttggcttgttgtttgtatacgatcta
gagactgcttctcctatctacagaaaccggataagtacagacccaattttcttgacttct
gaagcctcttctgttgggggtttctatgccattaataggagaggacaagttcttttggct
accgtaaacgaggctactataataccttttattagtggtccattgaagaacttggagctt
gctgtcaatcttgctaaaagaggaaacctccctggtgcagaagatctggttgtaaagcgt
ttcaaagagctgttcgatcaaacaaagtacaaagaggctgctgagcttgcttctgaatct
cctcaggggattctaaggacacctgatacagtggccaagttccagagtgttcctgtacaa
gctgggcaaactcctccattgttacagtattttgggacgcttttaactaaaggaaagctc
aattcatatgagtcattggaactgtctcgccttgttgtgaatcaaaacaagaagaacctc
ctgaaaaactggttagaagaggataagttagaatgcagtgaagaacttggagaccttgtc
aagactttggataatgaccttgcactggaaatatacatcaaagcccagacatctccaaaa
gttgtagcagcacttgcagaaaaaagggagtttgacaacatcataatttactcagagaag
gttaagtacacacctgattacttgtttcttctgcaaaccatactccgtacagatcctcag
ggagccggagaatttgcagtaaagatgtctcatatgaaaggaggttgtccacttgacatc
aacaccatcactgacctttttcttcagagaaatctaatcagagaagctactgctttcctt
ttggatgtgctgaagccaaatttacctgagcatgcttttctgcagactaaggttctggag
atcaatttggtaacctttcctaacgtggctgatgccattttagcagggagtatgttcagc
cactatgaccggcctcgtgttgctcagctttgtgaaaaggctggactttatatccaatcc
ttaaagcattactcagagttaaatgatataaaacgtgtgattgtcaacacacatgccatt
gagccacaggctcttgttgattttctaggcactctttctagcgattgggttatggagtgc
atgaaagaacttttgatagttaacccgagaggcaacctacagataatcgttcaggcttgc
aaggagtactgtgaacaacttggtgttgatgcatgtattaaactctttgagcagtttaaa
tcatatgaagggctatactttttcctaggctcatatgttaggatgagtgaggatcctgag
gttcatttcaagtacattgaagcatctgcaaagactggtcaaataaaagaggttgagcgt
gtgactagagagtctaacttctacgatgctgaaaagacaaagaactttttaatggaagcg
aagcttcctgatgcaaggcctttgataaatgtttgtgaccgtttcggatttgtacctgat
cttactcattacctctacataaacaacatgctgcgttacattgaaggttacgctcaaaag
gtgaaccctgggagtgctcctttagttgtgggacagctgcttgatgatgaatgccctgaa
gatttcatcaaaggtctcatcatctctgttcgttcattgctgcctgttgaacctcttgtg
gaggaatgcgagaagaggaaccggctacgtctcctcacacatttcttggagcatctagta
accgagggaagccaagatgtgcatgtccataacgccttgggtaaaatcatcatcgacagt
aacaacaaccctgagcgtttcctaaccaccaaccagtactacgactctcgagttgtcggt
aagtactgcgagaaacgtgatcctacactggctgttgtgtcctacagaagaggacaatgt
gatgaggagctcatcaacgtcaccaacagaagctctttgctcaagttacaagctaggtat
gtagtggagaggatggatggtgatctctgggagatggttcttgatgagaacaatgagtat
agaagacaagttattgaccaagttgtgtctactgcattacctgaaaacaagagcccggag
caagtttcctctgctgttaaggcgttcatgactgctgatttgcctcatgagcttattgag
cttcttgagaagatagtgcttcagaactctgacttcagcgggaacatcaacctgcagaat
ctgctgatactgacggctgtcaaggcggatacatctagagttatggattatgtcaacagg
cttgagaactttgatgggcctgttgttggagaaatggcggtagaagctcaactctttgaa
gaagcgtttgctatttttaagaagtttaacttaaacgttgaggctgttaatgtattgctg
gataacatcaaaagcattgagcgtgctgctgagtttgctttcagggttgaagaagattct
gtgtggagccaagttgctaaagctcagctcagggaaggactagtcagtgatgcaattgag
tccttcatccgtgctgaggacgctactcatttcttggagatgatacgcgttgctgaggat
gctaatgtctatgatgacatggtcagttaccttctgatggttagaaacaaggtgaaggaa
gttaaagttgatagtgagctcatctacgcatatgcaaagatcgataggttaggcgaggtt
gaagatttcattctgatgccaaacgttgctaacttacaaatcgttggtgaccgcatgtat
gatgaagctatgtatgaagctgccaaaatagtctatgcgtttgtatcaaactgggggaag
ctagctgtcacgcttgtgaaactgcaacagttccaaggtgctgttgatgctgcaaggaaa
gcaagcagtgcaaagacatggaaggaagtgtgttttgcttgtgttgatgcagaggagttc
agattgggacagatctgtggcctaaacattatcattcaggtggatgacctggaagaagtc
agcgacttctaccaaaagaaaggcttcttcagtgaactaatctcactcatggagagtgga
cttgggctggaacgtgctcacatgggtatcttcactgagttgggtgtgctctacgctaga
tatcgttatgagaagcttatcgaacacatcaagctattctccactcgcctcaacattccc
aagcttatacgggcatgtgatgagcagcagcaatggcaggagcttacctatctctacatt
caatatgctgagtttgacaacgctgcgaccactgtcatgaaccactctcctgaagcgtgg
gagcacgtgcagtttaaagacattgttggcaaggttgcgaatgttgaagtctactacaag
gctgtgcacttttatttactggagcatccggatatgatcaatgatcttctcaacgtgctt
gctttgcggttggatcacacgcgtgttgttgatattatgcggaaggctggtcagttgcgt
cttgtcaagccatacatggttgcagttcagagcaacaatgtcagtgctgttaatgaagct
ttgaatgagatatacgtggaggaagaagactatgaaaggttgcgtgagtctattgattta
catgacagctttgaccagataggcctcgctcagaagatagagaaacatgagcttgttgaa
atgagacgtgtggctgcttatatctacaagaaagctggtaaatggaagcaatcaattgct
ttgtcaaagaaggataacttgtacaaagactgtatggaaactgcttcacaatctggcgac
catgaccttgcggaacaactacttgtttacttcattgaacaggggaagaaggaatgcttt
gctacatgtctctttgtgtgttatgatttaatccgaccagacgttgctctagaacttgcc
tggatgaacaacatggtcgactttgcctacccgtatcttctccaggtaatgcgagagtac
acaggcaaagtggatgaaataatcaaggacaagctggaggcacaaaaagaagcgaaggcc
aaagagcaggaagagaaggaagtcgtgtcccaacagaacatgtacgcacaattgttgcca
aatgctttaccggcaccaccgatgcaacttgctttaacggcaccacaaccaatgggaggg
atgcctctcatgccaccatttggaatgccaccaatgggtggctactaa
DBGET
integrated database retrieval system