KEGG   Brassica napus (rape): 106401031
Entry
106401031         CDS       T04128                                 
Name
(RefSeq) clathrin heavy chain 2-like
  KO
K04646  clathrin heavy chain
Organism
bna  Brassica napus (rape)
Pathway
bna04142  Lysosome
bna04144  Endocytosis
bna05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:bna00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106401031
   04142 Lysosome
    106401031
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    106401031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106401031
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    106401031
Membrane trafficking [BR:bna04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    106401031
Exosome [BR:bna04147]
 Exosomal proteins
  Proteins found in most exosomes
   106401031
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link
Other DBs
NCBI-GeneID: 106401031
NCBI-ProteinID: XP_013696903
LinkDB
Position
C5:53077584..53087347
AA seq 1695 aa
MAAPNAPITMKEVLTLPSVGINQQFITFTNVTMESDKYICVRETSPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDYLQMFNIEAKAKLKSHQMPDQVEFWKWI
TPKMLGLVTQNSVYHWSIEGDSEPVKMFDRATKLENNQIINYKCSPNEKWLVLIGIAPGP
PERPQLVKGNMQLFSVDQQQTQSLDAHAASFAQFKVPGNENPSTLISFATKSFNAGQITS
NVHVIELGALPGKASFTKKKADLSFLPDFADDFPVAMQISNKFSLIYVITKLGLLFVYDL
ETASPIYRNRISTDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGPLKNLEL
AVNLAKRGNLPGAEDLVVKRFKELFDQTKYKEAAELASESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNSYESLELSRLVVNQNKKNLLKNWLEEDKLECSEELGDLV
KTLDNDLALEIYIKAQTSPKVVAALAEKREFDNIIIYSEKVKYTPDYLFLLQTILRTDPQ
GAGEFAVKMSHMKGGCPLDINTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILAGSMFSHYDRPRVAQLCEKAGLYIQSLKHYSELNDIKRVIVNTHAI
EPQALVDFLGTLSSDWVMECMKELLIVNPRGNLQIIVQACKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYVRMSEDPEVHFKYIEASAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYINNMLRYIEGYAQKVNPGSAPLVVGQLLDDECPE
DFIKGLIISVRSLLPVEPLVEECEKRNRLRLLTHFLEHLVTEGSQDVHVHNALGKIIIDS
NNNPERFLTTNQYYDSRVVGKYCEKRDPTLAVVSYRRGQCDEELINVTNRSSLLKLQARY
VVERMDGDLWEMVLDENNEYRRQVIDQVVSTALPENKSPEQVSSAVKAFMTADLPHELIE
LLEKIVLQNSDFSGNINLQNLLILTAVKADTSRVMDYVNRLENFDGPVVGEMAVEAQLFE
EAFAIFKKFNLNVEAVNVLLDNIKSIERAAEFAFRVEEDSVWSQVAKAQLREGLVSDAIE
SFIRAEDATHFLEMIRVAEDANVYDDMVSYLLMVRNKVKEVKVDSELIYAYAKIDRLGEV
EDFILMPNVANLQIVGDRMYDEAMYEAAKIVYAFVSNWGKLAVTLVKLQQFQGAVDAARK
ASSAKTWKEVCFACVDAEEFRLGQICGLNIIIQVDDLEEVSDFYQKKGFFSELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLIEHIKLFSTRLNIPKLIRACDEQQQWQELTYLYI
QYAEFDNAATTVMNHSPEAWEHVQFKDIVGKVANVEVYYKAVHFYLLEHPDMINDLLNVL
ALRLDHTRVVDIMRKAGQLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYERLRESIDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGKWKQSIALSKKDNLYKDCMETASQSGD
HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWMNNMVDFAYPYLLQVMREY
TGKVDEIIKDKLEAQKEAKAKEQEEKEVVSQQNMYAQLLPNALPAPPMQLALTAPQPMGG
MPLMPPFGMPPMGGY
NT seq 5088 nt   +upstreamnt  +downstreamnt
atggcggcacctaacgcccccatcacgatgaaggaggtcctgacgcttcctagcgttggg
ataaatcagcaattcatcacgtttacaaatgttacaatggagtctgacaagtatatatgc
gtgcgagagacgtcaccacaaaacagtgttgtgattattgatatgaatatgcccatgcag
cctcttagaaggcctatcactgcagattctgctcttatgaacccaaactcaagaatcctt
gcattaaaagctcaagttccaggaactactcaggattatctacagatgtttaacattgaa
gcaaaagcaaagctgaaatcacatcagatgcctgaccaggttgagttttggaagtggatt
acacccaagatgttggggctggtcacacaaaactcagtgtatcactggtccattgaaggt
gattctgagccagtgaagatgtttgatagagcgaccaagttggaaaacaatcaaattatt
aactacaagtgctctcctaatgagaagtggttggtcttaattggaatcgctcctggtcct
cctgagagaccacaattggtaaaaggaaacatgcagctattttctgtggatcaacagcag
acccagtcccttgacgcacacgctgcatcatttgctcagtttaaggtccctgggaatgag
aatccttctacccttatatcctttgcaaccaagagctttaatgctgggcagataacatca
aatgtgcatgtcattgagcttggtgccctacccggaaaggcatcatttacaaaaaagaag
gcagatctctcttttctcccagattttgctgatgattttcctgttgccatgcagatctct
aacaagtttagcttgatatatgtcatcaccaagcttggcttgttgtttgtatacgatcta
gagactgcttctcctatctacagaaaccggataagtacagacccaattttcttgacttct
gaagcctcttctgttgggggtttctatgccattaataggagaggacaagttcttttggct
accgtaaacgaggctactataataccttttattagtggtccattgaagaacttggagctt
gctgtcaatcttgctaaaagaggaaacctccctggtgcagaagatctggttgtaaagcgt
ttcaaagagctgttcgatcaaacaaagtacaaagaggctgctgagcttgcttctgaatct
cctcaggggattctaaggacacctgatacagtggccaagttccagagtgttcctgtacaa
gctgggcaaactcctccattgttacagtattttgggacgcttttaactaaaggaaagctc
aattcatatgagtcattggaactgtctcgccttgttgtgaatcaaaacaagaagaacctc
ctgaaaaactggttagaagaggataagttagaatgcagtgaagaacttggagaccttgtc
aagactttggataatgaccttgcactggaaatatacatcaaagcccagacatctccaaaa
gttgtagcagcacttgcagaaaaaagggagtttgacaacatcataatttactcagagaag
gttaagtacacacctgattacttgtttcttctgcaaaccatactccgtacagatcctcag
ggagccggagaatttgcagtaaagatgtctcatatgaaaggaggttgtccacttgacatc
aacaccatcactgacctttttcttcagagaaatctaatcagagaagctactgctttcctt
ttggatgtgctgaagccaaatttacctgagcatgcttttctgcagactaaggttctggag
atcaatttggtaacctttcctaacgtggctgatgccattttagcagggagtatgttcagc
cactatgaccggcctcgtgttgctcagctttgtgaaaaggctggactttatatccaatcc
ttaaagcattactcagagttaaatgatataaaacgtgtgattgtcaacacacatgccatt
gagccacaggctcttgttgattttctaggcactctttctagcgattgggttatggagtgc
atgaaagaacttttgatagttaacccgagaggcaacctacagataatcgttcaggcttgc
aaggagtactgtgaacaacttggtgttgatgcatgtattaaactctttgagcagtttaaa
tcatatgaagggctatactttttcctaggctcatatgttaggatgagtgaggatcctgag
gttcatttcaagtacattgaagcatctgcaaagactggtcaaataaaagaggttgagcgt
gtgactagagagtctaacttctacgatgctgaaaagacaaagaactttttaatggaagcg
aagcttcctgatgcaaggcctttgataaatgtttgtgaccgtttcggatttgtacctgat
cttactcattacctctacataaacaacatgctgcgttacattgaaggttacgctcaaaag
gtgaaccctgggagtgctcctttagttgtgggacagctgcttgatgatgaatgccctgaa
gatttcatcaaaggtctcatcatctctgttcgttcattgctgcctgttgaacctcttgtg
gaggaatgcgagaagaggaaccggctacgtctcctcacacatttcttggagcatctagta
accgagggaagccaagatgtgcatgtccataacgccttgggtaaaatcatcatcgacagt
aacaacaaccctgagcgtttcctaaccaccaaccagtactacgactctcgagttgtcggt
aagtactgcgagaaacgtgatcctacactggctgttgtgtcctacagaagaggacaatgt
gatgaggagctcatcaacgtcaccaacagaagctctttgctcaagttacaagctaggtat
gtagtggagaggatggatggtgatctctgggagatggttcttgatgagaacaatgagtat
agaagacaagttattgaccaagttgtgtctactgcattacctgaaaacaagagcccggag
caagtttcctctgctgttaaggcgttcatgactgctgatttgcctcatgagcttattgag
cttcttgagaagatagtgcttcagaactctgacttcagcgggaacatcaacctgcagaat
ctgctgatactgacggctgtcaaggcggatacatctagagttatggattatgtcaacagg
cttgagaactttgatgggcctgttgttggagaaatggcggtagaagctcaactctttgaa
gaagcgtttgctatttttaagaagtttaacttaaacgttgaggctgttaatgtattgctg
gataacatcaaaagcattgagcgtgctgctgagtttgctttcagggttgaagaagattct
gtgtggagccaagttgctaaagctcagctcagggaaggactagtcagtgatgcaattgag
tccttcatccgtgctgaggacgctactcatttcttggagatgatacgcgttgctgaggat
gctaatgtctatgatgacatggtcagttaccttctgatggttagaaacaaggtgaaggaa
gttaaagttgatagtgagctcatctacgcatatgcaaagatcgataggttaggcgaggtt
gaagatttcattctgatgccaaacgttgctaacttacaaatcgttggtgaccgcatgtat
gatgaagctatgtatgaagctgccaaaatagtctatgcgtttgtatcaaactgggggaag
ctagctgtcacgcttgtgaaactgcaacagttccaaggtgctgttgatgctgcaaggaaa
gcaagcagtgcaaagacatggaaggaagtgtgttttgcttgtgttgatgcagaggagttc
agattgggacagatctgtggcctaaacattatcattcaggtggatgacctggaagaagtc
agcgacttctaccaaaagaaaggcttcttcagtgaactaatctcactcatggagagtgga
cttgggctggaacgtgctcacatgggtatcttcactgagttgggtgtgctctacgctaga
tatcgttatgagaagcttatcgaacacatcaagctattctccactcgcctcaacattccc
aagcttatacgggcatgtgatgagcagcagcaatggcaggagcttacctatctctacatt
caatatgctgagtttgacaacgctgcgaccactgtcatgaaccactctcctgaagcgtgg
gagcacgtgcagtttaaagacattgttggcaaggttgcgaatgttgaagtctactacaag
gctgtgcacttttatttactggagcatccggatatgatcaatgatcttctcaacgtgctt
gctttgcggttggatcacacgcgtgttgttgatattatgcggaaggctggtcagttgcgt
cttgtcaagccatacatggttgcagttcagagcaacaatgtcagtgctgttaatgaagct
ttgaatgagatatacgtggaggaagaagactatgaaaggttgcgtgagtctattgattta
catgacagctttgaccagataggcctcgctcagaagatagagaaacatgagcttgttgaa
atgagacgtgtggctgcttatatctacaagaaagctggtaaatggaagcaatcaattgct
ttgtcaaagaaggataacttgtacaaagactgtatggaaactgcttcacaatctggcgac
catgaccttgcggaacaactacttgtttacttcattgaacaggggaagaaggaatgcttt
gctacatgtctctttgtgtgttatgatttaatccgaccagacgttgctctagaacttgcc
tggatgaacaacatggtcgactttgcctacccgtatcttctccaggtaatgcgagagtac
acaggcaaagtggatgaaataatcaaggacaagctggaggcacaaaaagaagcgaaggcc
aaagagcaggaagagaaggaagtcgtgtcccaacagaacatgtacgcacaattgttgcca
aatgctttaccggcaccaccgatgcaacttgctttaacggcaccacaaccaatgggaggg
atgcctctcatgccaccatttggaatgccaccaatgggtggctactaa

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