KEGG   Brassica napus (rape): 106401226
Entry
106401226         CDS       T04128                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106401226
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106401226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106401226
   03041 Spliceosome [BR:bna03041]
    106401226
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106401226
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106401226
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106401226
 Complex C
  U2 snRNP components
    106401226
SSDB
Motif
Pfam: LSM SM-ATX LSM14
Other DBs
NCBI-GeneID: 106401226
NCBI-ProteinID: XP_013697150
LinkDB
Position
A8:23052533..23053685
AA seq 93 aa
MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKFPHMLSVRNC
FIRGSVVRYVQLPPDGVDVDLLHDAARREARGA
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttttcttacttcaaggatttggttggacaagaagtgacggttgagctgaag
aacgatttggcaatcagagggactcttcattcggttgatcagtacctcaatatcaagctc
gagaacactcgggttgttgatcaggacaagttccctcacatgctttcggtgagaaactgt
ttcatcagaggatcagtggtgaggtacgtgcagttacctcctgatggagtcgatgttgat
ctacttcatgatgctgctagaagagaagctcgaggtgcttga

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