Brassica napus (rape): 106401290
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Entry
106401290 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106401290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106401290
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106401290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Xol-1_GHMP-like
Motif
Other DBs
NCBI-GeneID:
106401290
NCBI-ProteinID:
XP_048614052
LinkDB
All DBs
Position
C5:complement(7354764..7361408)
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AA seq
1452 aa
AA seq
DB search
MSQDEEIVMRDVTNAGLCVGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV
GDTWELPSVLIDRYNSAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGE
EQAICAVGLAKCRPRVFVEAIQYLLVLATPVELVLVGVCCIEGPDGRDPYAEISVQPLPD
YTISSDGVAMTCVACTNKGRIFMAGRDGHIYELLYTTGSGWHKRCRKVCLTAGVGSMISR
WVVPNVFKFGAVDPVVEMVIDNERQILYARTEEMKLQAYVFGPNGEGPLKMVAEERNLLN
QKDLSQGNRQSAAAGRANKPTIVSISPLSMLESKWLHLVASLSDGRRMYLSTSSSGSSFS
GFNNHRQAPNCLKVVSTRPSPPLGAGVGLGFGAASLAGRTPNEDLSMKVDTAYYSVGTLV
LSDSSPPAMSSLLVVSKDSSVHSQVGGTSGSSSRSSRALREVVSSLPIEGRMLFVADVLP
SPDTAATIQSLYSELEYCGLEVSGESYEKACGKLWARGDLSTQHILPRRKIVVFTTMGMM
ELVFNRPVDILRRLLESNSPRSLLEDFFTRFGAGEAAAMCLMLAARIINFEDLISNIVAD
KAAEAFEDPRMVGMPQFDGSSGLSNTRTATGGFSMGQVVQEAEPIFSGAHEGLCLCTSRL
LFPIWELSVMSKKPSSDSMSGDGLVVCRLSTSAMHMLESKIRSLEKFLRSRRNQRRGLYG
YVAGLGGVTGSILYGTGTELGASERNMVRSLFGAYSNGGESANKRQRLPYSPAELAATEV
RAMECIRQLLLRSAEALFLLQLLSQHHVARLVQGLDANLKQALVQLTFHQLVCSEEGDQI
ATRLISAVMEYYTGSDGRGTVDDISGRLREGCPSYFKESDYKFFLAVERLERAAVAVDAE
EKESVAREAFSFLSKVPGSADLRTVCKRFEELRFYEAVVCLPLQKAQALDPDGDAFNDQI
DASIREHALAQRKQCYEIIANALRSLASSMLDEASRRQYICQIVHLGVQSTDKAFREYLY
TAMIELGLENELLEYGGPDLVPFLQNAGSPSASEVGAVSGSSPLGHSGTQISSNQAKYFD
LLAKYYVSKRQHVLAAHVFLRLAERRAIVSGDNPTLEQRRQYLSHAVLQAKNASNSDGLA
GSAQGGCDSGLLDLLEGKLAVLQFQIKIRDKLEAIASSFESSDAMQDSEPVLNGDSSDDS
SLANAANEKALELSVELKSITQLYNEYAVPFELWEICLEMLYFANYSGDADSSIIRETWS
RLMEQALSQGGIAEACSVLKRVGSHVYPGDGVVLPLDVLCLHLEKAALERSERNELVGDE
DIARALLAACKGAAEPVLNAYDRLLSNVAIVPSPNLRIRLLGSVLVVLLEWAMSVLSDRM
GSSPARSSLILGGSFAHENKAVVNQGVRDKIASAANRYMTEVRRLTLPPTMTEGVYAGFK
KLDESLLSPFSF
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagacgaggagattgtgatgcgggacgtgacgaacgcgggactctgcgtcggt
gaccgcattggccgagaagccgcatctcagctcgatctagaggaagctctagaagcttcc
agatacgctagtcatccgtactccactcatcccagagagtggccaccgttgatcgaagtg
ggtgacacgtgggagttgccttctgtacttattgataggtataattcggcaggtggtgaa
gggacggccttgtgtgggatttttccagagattcgacgggcttgggcgtccgttgacaac
tctctcttcttgtggcgttttgacaaaagggatgggcagtgtcctgagtatagcggggaa
gagcaggctatttgtgcggttggattagctaaatgtagacctcgagtttttgttgaagct
attcagtatcttttggtgttagcgactcctgttgagttggttcttgttggagtttgctgc
attgaaggacctgatggtagagatccttatgctgaaatttcagtacagcctctgcctgac
tatacaatatcatcagatggagtagccatgacatgcgttgcatgtaccaataaagggcgg
attttcatggctgggcgtgatggtcacatatatgagcttttatatacaactggctcaggg
tggcataaacgttgccgtaaggtgtgccttaccgcaggtgttggtagtatgatctcgagg
tgggttgtaccaaatgtattcaagtttggagctgttgatcctgttgtggagatggtaatt
gataatgaaaggcagattttatatgcccgaactgaagagatgaaacttcaagcatatgtc
tttggcccgaatggggaaggccctctcaagatggttgcagaagaaaggaatctgttaaac
cagaaggacttgagccaaggaaatcgacagtcagcagcggcaggtcgagctaacaagcca
actatagtcagcatttcaccattgtccatgctggaatccaagtggctgcaccttgttgct
tccttatcagatggcaggaggatgtatctctccacctcttcaagtggaagtagtttcagt
gggttcaacaaccaccgccaggctccgaactgtttaaaagtcgtttcaactaggccatct
cctccattgggggccggtgttgggcttggttttggagctgcatctcttgctggtagaact
ccgaatgaggatctctccatgaaggttgacacagcatattattctgttggaacccttgtc
ctttcagattcatcgccacctgctatgtcttctcttctggttgttagcaaagattcaagc
gtgcattctcaggttggcggcacttcagggtcaagttcaaggagttctcgggcgttacgg
gaagtagtctcctctctacccattgaaggccgtatgctttttgtagcagatgtgctcccc
tctcccgatactgctgctactattcaatcattatattcagaacttgaatactgtggactc
gaagtctcgggagagtcttatgaaaaggcttgtggaaaactctgggccagaggtgattta
tcgacccagcatattttgccaaggagaaagattgtcgtttttaccaccatgggtatgatg
gaactggtctttaataggcctgttgatatcttgagaagacttctagaatctaactctcca
aggtcccttctggaagatttcttcactcgctttggagcaggcgaagcagctgcaatgtgc
ttgatgttggctgctcggataataaattttgaagatttaattagtaacattgttgccgat
aaagcagctgaggcttttgaggatccgagaatggtaggaatgccacaatttgatggcagt
agtggattatcaaacactagaacagcaactggaggtttcagcatgggccaagttgttcaa
gaagctgagcccattttctcaggtgctcacgaagggctctgcctttgtacatcaagatta
ctttttcccatatgggaactttctgtgatgtctaaaaaacccagttctgatagcatgtct
ggggacggtctggtggtttgtcgactttctaccagtgctatgcatatgctggaaagcaag
attcgatcgttggagaaattcttaagatctagaaggaaccagagaagggggctttatgga
tatgttgctgggctaggaggtgtaactggctctattttgtatggtactggtacagagttg
ggagcaagtgaaaggaatatggttaggagcttgtttggagcctactccaatggaggcgaa
tcagcaaataaaagacagcgcttgccatatagtcctgctgaattggctgccacggaggtg
agggcgatggagtgtattaggcagttgcttctcagatctgcagaggcccttttcctactc
caacttctttctcaacatcatgttgctagattggttcagggccttgacgcaaacttaaag
caagctttggttcaattgacattccatcagttagtttgttctgaagagggtgaccaaatt
gcaacaaggctcatatctgccgtgatggagtattatactggctctgatggcaggggaaca
gtcgacgatattagtgggcgactacgtgaaggttgcccaagctatttcaaggagtcggat
tacaaattcttcctagctgttgaacgccttgaaagagctgctgtggctgtagatgccgag
gagaaagagagtgttgctagagaggcgttcagtttcttgagtaaagtcccgggatctgca
gatctcagaaccgtctgcaaacgttttgaggaactgaggttctatgaagctgttgtctgc
ttgcctttacagaaggcccaagcccttgatcctgatggcgatgctttcaacgaccaaatt
gatgcttccattagagagcatgctcttgcccagcgaaaacagtgctatgaaattattgcc
aatgccttgcgatctctagctagttccatgctagacgaggcttcacgtagacaatatata
tgccagattgttcatcttggtgtgcaatcaactgacaaggcattccgggagtacctatac
acggccatgatagaactgggtcttgaaaacgagctactggagtacggaggtccagatttg
gtaccttttctacagaatgctggcagtccttctgcatcagaggtcggagctgtttctgga
tcatctccgctgggtcactcagggacacagatttcatcaaatcaagcaaaatactttgat
ctacttgcgaaatactatgtgtcgaagagacagcatgtgcttgctgctcatgtgtttcta
cggcttgcagaaagacgcgcaattgtttcaggggataatcctactcttgaacaaaggcga
caataccttagtcacgcagttttacaggccaagaatgcaagcaatagtgatggtctagca
ggttctgctcaaggtggttgtgacagtgggttgcttgatctgcttgaaggcaaactagca
gttcttcagttccaaataaaaatcagagacaaacttgaagctattgcctccagttttgag
tcctcggatgccatgcaggactctgagccagtacttaatggtgattctagtgatgattcc
agcttagcaaatgcagcaaatgaaaaggccttggagctctccgtggaacttaaaagcata
acgcagttgtataatgaatatgctgtcccgtttgagctctgggagatctgtctggaaatg
ctctactttgccaactattctggggatgctgattcaagcataataagagaaacgtggtct
agactcatggagcaagctctttcacaaggcgggatagctgaagcctgttcagttctcaag
agagtgggatctcatgtatatcctggcgatggagttgttttaccgctcgacgttttgtgc
cttcacctcgagaaagctgcactcgagagatcagagaggaatgaactcgtaggggatgaa
gacatagctcgagctctactagccgcctgcaaaggcgcagctgaacctgtgctcaacgct
tatgaccgtttattatccaatgtagccattgtaccatctccgaatctaagaatccgtctc
cttggttcggttctggtggtgctcctggaatgggcaatgtctgtattgtcagacagaatg
ggatcgagtccagccaggtcttctctgatactaggtggttcgtttgcgcacgagaacaag
gctgttgttaaccaaggggtccgtgataagatcgcaagcgccgcaaacaggtacatgaca
gaggttaggagactgactctgccaccgacgatgacggagggagtatacgcaggtttcaaa
aaacttgacgagtctcttttaagtccattctccttctga
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