Brassica napus (rape): 106401321
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Entry
106401321 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106401321 isoform X2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106401321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106401321
03110 Chaperones and folding catalysts [BR:
bna03110
]
106401321
03029 Mitochondrial biogenesis [BR:
bna03029
]
106401321
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106401321
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106401321
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106401321
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
106401321
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106401321
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106401321
Exosomal proteins of other body fluids (saliva and urine)
106401321
Exosomal proteins of breast cancer cells
106401321
Exosomal proteins of colorectal cancer cells
106401321
Exosomal proteins of bladder cancer cells
106401321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
APG6_N
DUF3153
Motif
Other DBs
NCBI-GeneID:
106401321
NCBI-ProteinID:
XP_013697274
LinkDB
All DBs
Position
C5:complement(17462133..17467134)
Genome browser
AA seq
972 aa
AA seq
DB search
MSLRGVCGVVASLGLCFFRVEHSKLKRSMDQILALKEKLQNAKLMGMQKEDEKLRRGMES
KFPSTNTLCDQLTETLQHLASQIQQAEKDKERFEFKFSTSAQAINSLKQQMKDLSVKLSA
SEENIKSREKELEELQLEKGQKENSYQNEQCRTASFSNEKDAMINNSDAAIAEAKLNIEN
LNFQIEKVRLELTSKEDEGKYLVGVKEKLEQENMNIQLSADNLSEYIEAMIRHCRDIIKD
DKVTETIARDDDDVHIYSSGEGDTSGDDDYDDDDEEERDVNSKKGIDDQCEERAWKRSAH
LRSVSSSSVGAKEDATDTDPEGYRGFVPCPERSDILEILAARPDNLANYTALPSTLPSRI
SLYYAEMCLSEERFELLKKSEPQGQIGVSDTSGRLYLFWTPRPLDRKHVFKKRQVERREV
VAGYIRDQLFHALCWAYSLCDMVSASLVLHGWEKEFIPLCPRYLCEKVRPDLYGKDLKRG
ADLSSSAAHSCYGLSLEDGLAYVQDAGIPKEQNPTFNCNFKRASDPEEDLYRITDVFKYE
TMEQALVRLKSHPVAAKLTLFEGWSSDRIYRGPSKKGAGYIGEHEVLMLDCVLMDGEMVV
RCKSSNGERIGVLGYIFVSLEVMFLLAGKDDSRFCFKEPQYLINGFFSIGMDTGPLGLQF
TEKPNRKKRNLKKFKVVLEQITTDSESSELGMMRTEHGSMIAEAMSRVGRKETSTIVGDG
TTQEAVQKHLTQIKNLIEQAEQDYEKEKLSERIATLSGGVAVIQVGAQTETELKDKNLIE
QVEQDYEKEKLNARIAKLSGRVAVIQVGEQTEPELKEKKLRVEYALNAKKAAVEDGIVVG
GGCTLLRLASKVDTIKAALDDDEEKVGTDIVKRALSYPLNPVAKNAGVSGSIVSEKVLSN
ENVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVP
TGNPMDNSGNGY
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaagaggtgtgtgtggtgttgttgctagcctaggattgtgcttcttcagagtc
gagcactctaagctgaaaagatcaatggatcaaatacttgctttaaaggagaaactgcag
aatgctaagctcatggggatgcaaaaggaggatgaaaagcttcggagagggatggagtcc
aaatttccttcgactaacactctgtgtgatcaacttactgagactctgcagcacttggct
tctcagattcaacaagcggagaaggataaggagcgttttgagttcaagttctctactagt
gcgcaagcaattaactctttgaagcagcaaatgaaagatctatctgtaaaactgagtgct
tctgaagaaaacatcaaaagccgagagaaggaactagaagagctacaactcgagaaagga
cagaaagaaaactcttaccaaaatgaacagtgtagaactgccagtttctcaaacgagaaa
gatgctatgataaataattctgacgcagctatagccgaagcaaaactcaacattgagaat
ttgaacttccaaattgagaaggtgaggcttgagttaacatcaaaagaagatgaaggcaaa
taccttgttggcgtcaaggagaagcttgaacaagagaatatgaatattcagttgagtgct
gataatctttctgagtacattgaagccatgatcaggcattgcagggacattatcaaggac
gacaaggttactgaaaccatagccagagacgacgatgatgtgcacatctattcttctgga
gaaggagacacctccggggatgatgattacgatgatgatgatgaagaagagagggatgta
aacagcaagaaaggaatagacgaccagtgtgaagagcgtgcatggaaacgaagtgctcat
ctcagatcagtttcatcaagctctgttggggcaaaagaagatgcaaccgatactgatcca
gaaggatacagaggttttgtcccatgccccgaacgttctgatatactagagatacttgcc
gcccgtcccgacaatttagctaactatactgccctgccgtctaccctgccgtcccgaatt
tctctttactatgcagagatgtgtctcagtgaggagagatttgagctcctaaagaaatca
gaaccccaaggtcaaataggggtttctgatactagtggccgactgtatttgttctggacg
ccaaggcctctagatcgaaagcatgtattcaagaaaagacaagtggagaggcgggaagtg
gttgccggctacattcgagatcagttatttcatgctctgtgttgggcctattccttatgc
gacatggtaagtgcttctttggtgcttcacggttgggagaaggaatttataccgctgtgt
ccgagatacttgtgcgagaaggttcgtccggacctgtatggaaaagatttaaaaagaggt
gcagatttaagtagttctgcagcccatagttgctatggtctgtctttggaagacgggttg
gcgtatgtgcaggatgctggcatacccaaagagcagaatcctacctttaactgcaatttc
aaacgggcatctgatcccgaggaagatttgtaccgcatcaccgatgtctttaaatatgaa
acaatggaacaagccttggtgcgccttaagagtcatcctgttgctgcaaaactgacgtta
ttcgagggatggagcagtgacagaatatatcgaggccctagtaagaaaggcgctggatac
attggtgaacacgaggtgttgatgctcgactgtgtcctaatggatggtgaaatggttgta
cgttgcaaaagtagcaatggtgagcgtattggagttttgggatacatatttgtttccctt
gaagtgatgtttctccttgccggtaaagatgactccagattctgcttcaaagaacctcaa
tacctcatcaatggtttcttctccataggcatggatacaggtccgctgggattacagttc
acagagaagcccaaccgcaaaaagagaaacctcaagaagtttaaggttgtacttgaacag
ataacaactgatagtgagtcatcggaactagggatgatgagaacagaacatggaagtatg
attgctgaagcaatgagcagagttggaaggaaggagacttcgaccattgtgggtgatggg
accacacaggaagcagtgcaaaagcatcttacacagattaagaatcttattgagcaagcg
gagcaagattacgagaaggaaaaactgagtgagagaatagcaacgctttctggtggagtt
gctgtgattcaggtcggagcacaaactgagacagaactcaaagataagaatcttattgag
caagtggagcaagattatgagaaggaaaaattgaatgcgcgaattgcaaagctttctggt
cgagttgctgtgattcaggtcggagaacaaacggagccagagctcaaagagaaaaaactg
agagttgaatatgctcttaatgctaaaaaggctgctgttgaggacggtattgtcgttggt
ggtggttgtactctgcttcgccttgcttccaaggttgataccattaaagccgcccttgac
gatgatgaagaaaaggtcggaacagacatcgtgaaaagagcacttagttaccctctaaac
ccggttgctaagaatgctggagtcagtggaagcatagttagcgagaaggtgctttccaac
gagaacgttaagttcggttacaatgctgcaactggcaagtacgaagatttgatggctgca
ggaatcatcgatccaacaaaggttgtgagatgttgcttggaacacgcagcttcggtggca
aagacatttttgatgtcagactgtgttgttgttgagatcaaggaacctgagccagttccc
acaggcaacccaatggacaactcaggaaatggatactga
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