Brassica napus (rape): 106401355
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Entry
106401355 CDS
T04128
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106401355
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106401355
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106401355
NCBI-ProteinID:
XP_013697313
UniProt:
A0A816K4M6
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Position
C2:47582425..47588679
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AA seq
590 aa
AA seq
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MAASSSSNASFFGVREEDQTHLLPPNPSAAVAPPPPHHQPLQSQQPLEAPPQKKKRNQPR
TPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKR
KVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC
GTKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYGQNTNSNNNS
SSMMLGLSHTGAPQHLDYHSGDVLRLGSGEGVGGGAASRSSSDLIAANVSGYFMQDQNPS
FHDQQQGFLAASNNIKPSPMNFQQSLMQFSHDSHNSPSSNLFNLSFLSGNNGAASATSNQ
NAAAVSSGNLMISNHFDGENAIGGGGGGEGSTGLFPNNLISSADRTSSGAVPSLFSSSMQ
NPISTPQMSATALLQKAAQMGSTSSSSNNNNNNGSSNNNNNNASSILRNFGSGMYGENES
NLYDLMNSFSNPDPTGNNVNGVHSPFGSYGGVNKGLNADKQSMTRDFLGVGQIVRSMSGS
GGVQQQQQQHGNSRERVGSSSDSVDRNSTTLNPGGGPATSPPYGIHHASF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatcctctaatgcttccttctttggagttcgagaagaagatcaaact
caccttcttcctccgaatccctccgcggccgtcgctcctcctcctcctcaccaccagcca
ctgcagtctcagcaacctcttgaagctccaccgcagaaaaagaagagaaatcaaccaaga
actccaaattccgatgcagaagtgatcgctttatctccaaagacactaatggctacaaat
agattcatatgcgaagtatgcaacaaaggttttcagagagaacagaatctacaacttcat
cgaagaggacacaatctcccatggaaacttaagcagaagtcgaccaaagaagtgaagagg
aaagtgtatctttgtccggagcccacgtgcgtccaccatgatccgtcacgtgctctcgga
gacctcaccggaatcaagaaacattattaccgtaaacacggtgaaaagaagtggaaatgc
gagaaatgttctaagcgttacgctgttcaatcggattggaaagctcactccaagacttgt
ggtaccaaagagtatcgttgcgactgtggtacactcttctcccggcgagatagtttcatt
acacatagagccttctgtgacgcgttggctcaagagagtgcgagacacccaacttctttg
acttctttaccaagtcatcacttcccgtacggacaaaacaccaactccaacaacaacagt
tcaagcatgatgcttggtttgtcccacacgggggccccacagcatcttgattatcactct
ggcgacgttctccgacttggaagcggcgaaggagtaggtggaggagccgcctcacgctct
tcatctgatctcattgctgcaaatgtttcaggttacttcatgcaagaccaaaaccctagc
tttcatgatcaacaacaaggatttttggctgcaagcaataacatcaagccatcaccaatg
aattttcaacagagtctgatgcagttctcgcatgatagccataactctccttcctccaat
ctcttcaatctcagtttcctctctggaaacaacggagctgcttctgctacaagcaaccag
aatgctgctgctgtttcttccggtaatcttatgatctcgaaccattttgatggcgaaaat
gctattggaggcggaggaggaggggaaggaagcacgggtctctttcctaacaatctgatt
agctcggcggacagaacaagctcaggagcagtgccttcactctttagctcatcaatgcaa
aatcccatatcaacacctcaaatgtcagccactgctcttcttcaaaaagctgctcaaatg
ggttcaacctcaagcagcagcaacaacaacaacaacaacggaagcagcaacaataataat
aacaatgcctcatccattctaagaaactttgggagtggaatgtacggagaaaacgagagt
aatctctatgatttgatgaactctttctctaaccccgatccaacgggaaacaacgttaat
ggagtacattctccgtttggttcgtacggaggagtgaacaagggattaaacgctgataaa
caaagcatgactagagactttcttggagttggacagatcgtaagaagcatgagtggaagc
ggaggggttcaacaacagcaacaacaacatgggaatagtagagaaagagttggctcttcg
tcggattctgtcgatagaaacagcacgactttgaatcctggtggtggtccggcaacttca
ccaccgtatggaatccatcatgctagtttctag
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