Brassica napus (rape): 106401423
Help
Entry
106401423 CDS
T04128
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106401423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106401423
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106401423
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106401423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
EXOSC1
S1
Motif
Other DBs
NCBI-GeneID:
106401423
NCBI-ProteinID:
XP_013697388
LinkDB
All DBs
Position
C5:1022825..1024661
Genome browser
AA seq
323 aa
AA seq
DB search
MMMRKIQLPFTQTQKVRYERAIERLQSLSSTVNSDASVIVTDTIPVNHEDAFLKGHGTSE
VDGELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFTQDGV
LMLSSMNMPDGSQRRRTSVDELNMRNIFVEHDVVCAEVRSIQHDGSLQLHARSQKYGKLE
KGQLLKVDPYLVKRSKHHFHYIESLGIDLIIGCNGFIWVGEHVEVRDPVMMIDGQKDDEM
ISSSSSTKEQSHTPLETRQNICRIGNAIRVLSNLGFTVTVQVITETVNLSNSKNVDIHEM
LCSEFHVLVAENEAERRREKRKK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgagaaagatacagctaccgtttacccagacgcagaaggtcaggtacgagaga
gcaatcgagcggctacaatcactctcatcgacggtaaactccgacgcatctgttatcgtc
acggacaccattcccgtcaaccacgaagacgccttcctcaagggacacggaacttccgag
gtcgacggcgagctgctcgcgacggtctgtggagttgttgagcgcgtggataagctcgtc
tatgtacgcaccttacgcgccaggtacaagcctgaggttggtgatatcgtagtaggccgt
gtcattgaggttgctcaaaaacgttggagagtagagctaaactttactcaggatggtgta
ctaatgctttcttccatgaacatgcccgatggtagtcagaggcgaagaacgtctgtagat
gaactcaacatgcggaacatctttgtagaacatgatgtcgtttgtgccgaagtacgcagc
attcagcatgatgggagcttgcagttacacgcacgaagtcagaagtatggaaagcttgag
aagggacagcttctcaaggttgatccttacttggtcaagagaagcaaacatcacttccat
tacatagaaagccttggcatcgatttgatcatcggctgcaatggcttcatatgggtgggg
gaacacgtcgaggtcagagatcctgtgatgatgatagatggtcaaaaggatgatgagatg
atctcttcctcctcctccaccaaagagcagagccacactccactcgagactcgacaaaac
atatgcagaatcgggaatgccatacgcgtcttatccaacctaggcttcaccgtgactgta
caagtgatcacggagactgttaacctcagcaactcaaagaatgtcgacatacacgagatg
ctctgttcagagtttcacgttttggtagcagagaatgaagctgaaagaagacgtgaaaag
aggaaaaagtga
DBGET
integrated database retrieval system
