KEGG   Brassica napus (rape): 106401460
Entry
106401460         CDS       T04128                                 
Name
(RefSeq) serine hydroxymethyltransferase 6
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bna  Brassica napus (rape)
Pathway
bna00260  Glycine, serine and threonine metabolism
bna00460  Cyanoamino acid metabolism
bna00630  Glyoxylate and dicarboxylate metabolism
bna00670  One carbon pool by folate
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
bna01200  Carbon metabolism
bna01230  Biosynthesis of amino acids
bna01240  Biosynthesis of cofactors
bna04981  Folate transport and metabolism
Module
bna_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    106401460
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    106401460
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    106401460
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    106401460
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    106401460
Enzymes [BR:bna01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     106401460
SSDB
Motif
Pfam: SHMT
Other DBs
NCBI-GeneID: 106401460
NCBI-ProteinID: XP_013697434
LinkDB
Position
C5:13782830..13785772
AA seq 572 aa
MDRAAQSDLSLGFSSSHALPLPPPRIPIADDSITLQIDSSPTPPVPLQLLEQRFEGTGSS
SRAIVDKDEDFDDDQRGEFILLGQPLKLKRCRGSSSSKRFAADPETRRAAVKAWGDQSLS
EADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQ
YIDHIEILCQERALQAFGLHHEHWGVNVQPYSCTSANFAVFSGLLLPGERIMGLDSPSGG
HMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPKILICGGSSYP
RDWDFPRFRYVADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTHKSLRGPRGGI
IFYRRGFKGKKQSINLNHCESNFQYDFEEKINFSVFPSLQGGPHNNHIAALAIALKQAAS
PEYKAYMRQVKKNAKALASALISKNCKLVTNGTDNHLMLWDLTPLGLTGKVYEKVCEMCH
ITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLESDFETMAEFLYRAALIASAAQREQGK
SLKSIYHCKDIADLRNQVEAFASQFAMPASDM
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggaccgtgctgctcaatcggatctctccttgggattcagcagctcccacgccttgccg
cttcctcctccgcgaatcccgatcgccgatgactcgatcacgcttcaaatcgactccagc
ccgacgccccccgtccctctccagcttctcgagcagagattcgaaggcaccggatcgagt
agccgagccatcgtcgataaagacgaagactttgatgatgatcagaggggggagttcatc
ctattgggacagccgttgaagctaaaacgctgtagaggtagcagcagtagcaagcgattc
gcagctgatccagaaactagacgagccgccgtcaaagcgtggggcgaccagtctctctcg
gaagcagatcccgagattcacgagttcatggagaaggagaaacagagacagttcagagga
atcgagctcatagcctccgagaatttcgtgtgtagagcggtgatggaagctttgggaagc
catttgactaacaagtactcagaaggcatgcctggagctagatactacacagggaaccag
tacatcgatcatatcgagattctttgccaagaacgtgcactgcaagctttcggtcttcac
catgagcattggggggttaacgtgcagccttactcttgcacgtccgcgaacttcgctgtc
ttctctggtcttttgttgcctggtgaacggatcatggggttggattctccttcgggtggt
catatgagtcatggatactacacgccgggtgggaagaaagtctctggtgcgtctatattc
tttgagagctttccctataaggtggatcctcgtacagggtacattgattacgacaagctt
gaggagaaggcgcttgactatcgtcctaagatacttatctgtggagggagctcgtatcct
agagactgggactttcctaggtttaggtatgttgctgacaaatgtggagctgttctcatg
tttgacatggcacagattagcggtcttgtggctgccaaggaaagtccaaatccatttgat
tattgcgatatagttacctcaacgacacacaagtctctccggggacctaggggaggtatc
atattttacaggagaggcttcaagggcaagaagcaaagcataaatcttaatcactgcgag
agcaatttccaatatgattttgaggagaaaataaacttttctgtcttcccatcgctgcaa
ggaggtcctcacaataaccatatagccgctctagccattgccctgaagcaggccgcttca
ccagagtacaaggcttacatgcgccaggtcaagaaaaatgccaaggctttagcatctgct
ttgataagcaaaaactgcaagttggtaacaaatggcactgataatcatttgatgctctgg
gatctgactcctttgggattgacaggcaaagtgtatgagaaagtatgcgagatgtgccat
atcacggtcaacaaagtcgccattttcagtgaaaacggtgttatttcccctggaggagtg
agaataggtagtccggctatgacttcaaggggctgtctagaatcagattttgagacaatg
gctgagtttctgtatagagctgctctgatagcaagtgctgcacaaagggagcaggggaag
tcactcaaaagcatctatcactgtaaggacattgcagatcttaggaaccaagtcgaggct
tttgcttctcagtttgcaatgcctgcgtctgacatgtga

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