Brassica napus (rape): 106401469
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Entry
106401469 CDS
T04128
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E
KO
K07466
replication factor A1
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03420
Nucleotide excision repair
bna03430
Mismatch repair
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106401469
03420 Nucleotide excision repair
106401469
03430 Mismatch repair
106401469
03440 Homologous recombination
106401469
03460 Fanconi anemia pathway
106401469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106401469
03032 DNA replication proteins [BR:
bna03032
]
106401469
03400 DNA repair and recombination proteins [BR:
bna03400
]
106401469
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106401469
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106401469
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106401469
MMR (mismatch excision repair)
106401469
DSBR (double strand breaks repair)
HR (homologous recombination)
106401469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
106401469
NCBI-ProteinID:
XP_013697447
LinkDB
All DBs
AA seq
806 aa
AA seq
DB search
MGEILTAGVIEMIRNDRVKNHEQMKPVLQVTELKLFTAQQEPSKERIRVLLSDGTAFIQG
MLGVALNPLVKDGVLQPGSILRLDHFVCSEIQKKKIVVIAQLEVITTKSDIIGDHARGRK
ATEQHGGDSGNTSYEQHGRTDVSSARQINSTETGTSLVGQQRRQVFGSGSGSGSSFEQHG
RSDLSGGRQINNNGTGTSHAGIGQQRQQVYGSGSSLPGSYNNPSAGLVRDPPPTYPLQRH
QPPPPMYQNRGPVARNEAPPRIIPINALNPYSGRWTIKARVTSKGDLRTYNNPRGGGKVF
SFDLLDADGGEIRVTCFNAVADQFFDQIVVGNLYLISRGNLRPAQRKFNHLPNDYEISLD
NASTVQQCHEEDAAIPQNQYNFRSIGDIESMETNSIIDVIGVVSSISPTGTIMKKTGTET
QKRSLQLKDMSGRSVEVTMWGSFCNAEGQKLQSLCDSGEFPVLAVKAGRVSEFNGKAVST
IGSSQLFVEPDLAEAQKLKEWFAREGRSAPCISISREFTGGGRVDVRKTISQIKDEKLGT
SEKPDWITVNATIIYMKVDNFYYTACPLMNGDRQCNKKVTDNGDGTWRCEKCDKCVDECD
YRYILQLQLQDHTGLTWVTAFQEAGEEIMGMPAKDLYYVKHEHNDEEKFEDIIRKVAFTK
YIFKLKVKEETYGDEPTVKATVVKVDKVNYSSDTRTILDAMEKLRTAEAGSSGVGTSGTR
DVSSVERREFGLPANQSDQYGNQSSNGARPHDGGGASCDVCGNTGHVSANCPNTRSGPQG
QYMGGGSYGGSGSYGGGLPRQHVGSY
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggggagattctgacggcgggggtaatcgagatgataagaaacgatagagtgaagaac
catgaacagatgaagccggttcttcaagtgacggaattgaagctgttcacggctcagcaa
gaaccgtccaaggagaggattagggtcttgttatcagacgggacggcctttattcagggg
atgctgggggttgctctcaaccctcttgttaaagatggggttcttcaacccggttccatc
cttaggctcgatcatttcgtctgtagtgagatccagaagaaaaagattgttgttattgcg
caattggaagtgattacaacgaagtctgatattattggagatcatgcacgagggcgaaag
gctactgaacagcatggaggagactctggtaacactagttatgagcaacacggtaggact
gatgtgagtagtgctcgtcaaatcaacagcaccgagacagggacaagtcttgttggtcaa
cagagacgacaagtgtttggttctggttctggttctggttctagttttgagcaacatggt
aggagtgatttgtctggtggtcgtcaaatcaacaacaacgggacagggacgagtcatgca
ggtattggccaacagagacaacaagtgtatggttctggttctagtctacctggatcatac
aacaatccatctgcaggtcttgtgcgtgaccctccacccacttatcctctccagcgccac
cagccaccaccaccaatgtatcagaacaggggaccagtggcgaggaacgaggcacctcct
aggatcattcccatcaatgctcttaacccttactcaggcaggtggaccatcaaagccagg
gtcacgagcaaaggagatctcaggacttacaacaacccacgcggcggtgggaaagtgttc
agcttcgatcttctcgacgctgatggtggagagataagagtcacttgcttcaacgccgtg
gctgaccagttctttgaccagatcgtcgtcggcaacctttacctaatctcaagggggaac
ctccgtcccgctcagaggaagttcaaccatctccctaacgactacgaaatctcgctggac
aacgcgtcaacggtacagcaatgccacgaggaggacgctgccatccctcagaatcaatac
aacttccgttctataggtgatatcgagagcatggagactaacagcatcatcgatgtgatt
ggcgttgtctcgtccatcagccccactggaacaataatgaagaaaacgggtaccgagacg
cagaagagatctcttcagctgaaggacatgtctggtcggagcgttgaggtaaccatgtgg
ggtagcttctgcaacgcagagggacagaagctgcagagtctctgcgactctggtgagttt
cctgttcttgcagttaaggcggggagggtcagcgagtttaatggtaaggcggtgagcacc
attgggtcaagccagctctttgttgagccagacctcgctgaagctcagaagcttaaggaa
tggtttgctagagaaggaaggagcgctccttgcatctccatatcgagagagttcaccggt
ggcggcagagtagatgtccgcaaaacaatctctcaaatcaaggacgagaagctagggacc
tcggagaagcctgactggatcacagtcaacgccactattatatacatgaaggtggacaac
ttctactacacggcttgtcctctcatgaacggtgatcgtcagtgcaacaaaaaggtgact
gacaacggagacgggacgtggcggtgcgagaagtgtgataagtgcgtggatgagtgtgac
tacaggtatatactgcagctccagttgcaggaccatacaggtctgacttgggtcacagcg
tttcaagaggctggtgaggagataatggggatgcctgctaaagatttgtattatgtgaag
catgaacacaatgatgaggagaagtttgaagatatcatccgtaaggttgcttttacaaag
tacatcttcaagctgaaggttaaagaagagacgtatggggatgagcctacggtgaaagca
acggttgtgaaagtagacaaggtaaactactcatcagataccaggactattctagatgct
atggagaaactcaggaccgccgaggctggcagctctggtgttggaacctcaggaacaaga
gatgtctcatcagtggaaagaagggagtttggtttacctgcaaaccaatcagatcaatat
gggaatcagtctagcaacggcgctaggcctcatgatggtggtggtgctagctgcgatgtc
tgtggaaacactggtcatgtttctgcaaactgtccaaacactaggagtgggcctcaaggg
cagtacatgggtggaggatcttatggaggctcggggagttatggaggaggactaccaagg
caacatgttggaagctactga
DBGET
integrated database retrieval system
