Brassica napus (rape): 106401619 Help Entry 106401619         CDS       T04128                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism bna  Brassica napus (rape) Pathway bna03030   DNA replication bna03410   Base excision repair bna03420   Nucleotide excision repair bna03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bna00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     106401619    03410 Base excision repair     106401619    03420 Nucleotide excision repair     106401619    03430 Mismatch repair     106401619  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:bna03032]     106401619    03400 DNA repair and recombination proteins [BR:bna03400]     106401619 Enzymes [BR:bna01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      106401619     6.5.1.6  DNA ligase (ATP or NAD+)      106401619     6.5.1.7  DNA ligase (ATP, ADP or GTP)      106401619 DNA replication proteins [BR:bna03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     106401619  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      106401619 DNA repair and recombination proteins [BR:bna03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      106401619    NER (nucleotide excision repair)     Other NER factors      106401619    MMR (mismatch excision repair)     Other MMR factors      106401619 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  106401619 NCBI-ProteinID:  XP_013697614 UniProt:  A0A816UTV7 LinkDB All DBs Position C8:48348153..48352449 Genome browser AA seq 799 aa AA seqDB search MLAIRSSNHFRCISSLCTKTRFSSALVSLNRQVSPFPSSYLHRAMSSSRPSAFDALMSKA RASAKKKTTPQASNSSPSPNKRKIAKTQDADSPKAEAFPDEPRSDSPSIAEDLKKGAKTQ DADLTKVEAFPDSDKPRSSIAKKSRTLSQTDKVDELKSKIVLLKRKPGEFDPERVCCWEK GERVPFLFVALAFDLISAESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIAPAHE GVELGIGEGSIIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVK VFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAAL GQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFT LGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNT GKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGV CIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDLGYFQFATALTSSDIDEIQKFLDASV DIGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVF GAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLNPDVW FEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIAD MYQAQKHNHPSNEAKGEDD NT seq 2400 nt NT seq  +upstreamnt  +downstreamnt atgttagcgattcgatcatcgaatcacttccgatgcatttcttctctctgcactaaaacc cgattctcctccgcattggtctctctcaatcgccaagtttctccctttccctcctcatac ctccacagagcaatgtcttcttctcgcccctctgcatttgacgctctcatgtcgaaagct cgcgcatccgccaagaagaaaacgacaccccaagcttccaattcatctccctccccgaac aaaagaaaaatcgcgaaaacccaagacgccgattcgccaaaggcggaagcttttcccgat gaacccagatcagattcgccgtcaattgcggaagatttgaagaagggagcgaaaacccaa gacgccgatttgacaaaggtggaggcttttcctgattcggataaacccagatcgtcaatt gcgaaaaagtctaggactttgagtcagacggataaagtcgacgaattgaagagtaagatt gtgttgctgaagaggaagcctggcgaattcgatccggagagagtttgttgttgggagaaa ggggagagagttccgtttctgtttgtggcattggcgtttgatttgatttcagctgagagt gggaggattgtgattactgatattctgtgtaacatgttgaggactgttattgccaccact cctgatgatttggtcgctactgtttatcttgcggccaacgagattgctcctgctcatgaa ggggtggagttggggattggtgaaggttctattatcaaggccatctctgaagcttttggt agaactgagtcccaggttaagaagctgaatacggaactaggagacttggggcttgtagca aaaggaagccgttcgtcacagactatgatgttcaagccagaaccattgactgttgtcaag gttttcaatacttttcgacaaattgctaaggaaagtggaaaagatagtacagaaaagaag aaggatcggatgaaggcacttcttgtggcagcaacagactgtgaacctctgtacttaact cgtttacttcaggcaaaattgcggttaggattctcaaatcagactgtcttagctgccttg ggacaagcagctgtttataatgaagagcactcaaagccacccccaaaaaccaagtctcct ttagaggaggctgcgaagattgttaaacaagtattcactgtgcttcctgtgtatgacatt attgttcctgctcttctaactggcggtgtgtggaatcttcctaaaacttgtaacttcaca cttggtgtacctattgggccaatgcttgcaaaaccaacaaaaggtgtaggcgagatactg aataagttccaggacacagttttcacatgcgaatacaaatatgatggagaacgtgcacag gtacattgtatggaggatggtacattcgagatatatagtcgaaatgctgaaaggaacact gggaagtaccctgatgttgctcttgcgttatcaagattaaagaagccttctgtgaaatct tttatcctggactgtgaggttgttgctttcgacagggagaaaaagaagattcttccgttt cagattttgagcactcgagcgcgtaagaatgtgaacgtcaatgatatcaaagttggcgtg tgcatctttgcttttgacatgttgtatctaaatggccagcaacttatccaggagaatctt gatattcgccgagagaagctatacggatcatttgaggaagatcttggatatttccagttt gcaactgctctaacatccagcgatatcgatgaaatacaaaagtttcttgacgcttctgtt gacattgggtgtgaagggctaatcattaaaacattgaattcagatgcgacatatgagcct gcaaagcgatccaataattggctaaaactgaagaaagactatatggacagcattggggac tctgtggatcttgtaccaattgctgctttccatggacgtggcaaacgcacaggtgtcttt ggtgcatttttactagcttgctacgatgctgataaggaagagttccagagcatttgtaaa ataggtactggattttctgaagctgtgcttgaagaacggtctaccagtctccggtccaga gtgattcctactcctaaacaatactaccgagttggagacagcctcaatccagatgtttgg tttgagcccactgaggtctgggaagtgaaggcagctgacttgaccattagccctgtgcat cgtgcagctaatggaattgtggatcctgataagggaatttctctacgttttcctcgttta ctccgtgtacgggaagacaagaagccagaggaagcaacatcatctgaacagattgctgat atgtaccaagctcaaaaacacaaccatccaagcaatgaagccaaaggtgaagatgattga

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