Brassica napus (rape): 106401637
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Entry
106401637 CDS
T04128
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106401637
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106401637
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106401637
03029 Mitochondrial biogenesis [BR:
bna03029
]
106401637
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
106401637
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class I (G)
106401637
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106401637
Prokaryotic type
Other AARSs
106401637
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
106401637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
106401637
NCBI-ProteinID:
XP_013697632
UniProt:
A0A816R8M5
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All DBs
Position
C1:complement(14486376..14491306)
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AA seq
657 aa
AA seq
DB search
MAAVRLTLFPVTATPPSSLCSFNPLSRCPHLAYLSSSSSYSSSSLSGVFRATTRRLVFAT
RSKSVATMAASQEFTGNLKREVEKLFDASLRLTVPDGTSVETEVAASLPGKPGDYQCNNA
MGLWSVIKGKGTQFRGPPAVGQAISKNLPASEMVETCSVAGPGFVNLVLSSKWMAKSIEK
MLIDGIDTWAPSLPVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRN
HVGDWGTQFGMLIEYLFEKFPDTESVTETAIGDLQTFYKESKTKFDSDPDFKEKAQKAVV
RLQGGDPIYRKAWAKICEISRTEFAKVYQRLKVELEEKGESFYNPFIANVIGELDSKGLI
EESEGARVIFLEGFNIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIVYVTDVGQQQH
FNMFFKAARKAGWLPDSDKTYPRVDHVGFGLVLGEDGKRFRTRSSDVVRLVDLLDEAKTR
SKTALIERGKDKEWTPEELDKTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLSDKGNTAV
YLLYAHARICSIIRKSGKDIDELKKTEKLALDHPEERALGLHLLRFAETVEEACSNLLPN
VLCHYLYDLSERYTSFYSIHQVIGSPEEASRLLLCEATAVVMRKCFHLLGITPVYKI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagtaaggctaacccttttcccggttacagctacaccgccgtcatctctctgc
tccttcaatcctctttctcgttgtcctcacttggcttatttgtcgtcctcttcttcttat
tcttcttcttctctatctggtgtattcagagcaacgactaggagacttgtttttgcaacc
agatcaaagtcagtggcaaccatggcagctagtcaagagttcacggggaatctaaaacgg
gaggtcgagaagctctttgatgcgtctctcagattaacggttcctgatggaactagtgtg
gagaccgaggttgctgcctctcttcctggaaaacctggagattaccaatgtaacaatgca
atgggtctatggtccgtaattaaaggaaagggtactcagttcaggggtcctccagctgtt
ggtcaggctatttcaaagaatctacctgcttctgagatggtggaaacttgttctgtagct
ggccctggatttgttaatcttgtactatcaagcaagtggatggctaagagtattgaaaaa
atgcttattgacggaattgacacatgggcgcctagtcttccagttaagagagccgtggtt
gatttttcctctcccaacattgctaaagaaatgcatgttggtcatctgagatcaaccatc
atcggtgacactctagctcgcatgctcgagtactcaaaggttgaagttttacgcagaaac
catgttggtgactggggaacacagtttggcatgctcattgagtacctctttgagaaattt
cctgataccgagagtgtgactgagacagccattggagatcttcagacgttttacaaagaa
tcaaagactaaatttgatagtgatccggacttcaaggaaaaggcacaaaaggctgttgtc
cgtctacagggtggagatcctatttaccgcaaggcttgggctaagatttgtgaaatcagc
cgaaccgagtttgccaaggtttatcagcgccttaaagttgagcttgaagaaaagggtgaa
agcttttacaacccctttatcgctaacgtaatcggggaattggatagcaaggggttgatt
gaagaaagtgagggtgctcgtgtgatcttcctcgaaggcttcaacatcccactcatggtt
gtaaagagtgacggtggttttaactatgcctcaactgatctgactgctctttggtatcgg
cttaatgaagagaaagctgagtggattgtatatgtcaccgatgtaggccagcagcagcac
ttcaatatgttcttcaaagctgccagaaaagcagggtggcttccagacagtgataaaact
tacccaagagtggaccatgttggttttggtctcgtccttggggaagatggcaagcgattt
agaactcgatcttcagatgtagtccgcctagttgatttgctggatgaggccaagactcgc
agtaaaactgcccttattgagcgtggtaaggacaaagaatggactcccgaggagctagac
aaaacagctgaggcagttggatatggtgctgtgaagtatgctgatctgaagaacaacaga
ttgacaaattatactttcaacttcgatcaaatgcttagtgacaagggaaatacagccgtt
taccttctttacgctcatgctcggatctgttcaatcatcagaaagtctggcaaagacata
gatgagctgaaaaagacagaaaagctagcattggatcatcctgaagaacgagcactgggg
cttcacttgcttcgatttgctgagacggttgaggaagcttgcagcaacttgttgccgaac
gtgttgtgtcactacctctacgacttatctgaacgctacacctccttctactccattcat
caggtcattggttcaccagaggaggcaagccgtctcctactttgtgaagcaacggctgta
gtgatgaggaaatgcttccaccttcttggaatcacccctgtttacaagatttga
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