Brassica napus (rape): 106401657
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Entry
106401657 CDS
T04128
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
106401657
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
106401657
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
PhoLip_ATPase_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
106401657
NCBI-ProteinID:
XP_022558973
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Position
C5:complement(4052198..4056028)
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AA seq
694 aa
AA seq
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MFKLSSHVYQLVATIGYRRHLLKQGGWIISLIMFLSLFEIAISQNQSSDPESTQVLQLHY
QDGHVVVDNGILQLTLSNPEGFVTGIRYNGIENVLAYTGNEHDRGYWDLVWNFPGKKVKK
SKGTLDRIEATKMEVITQSDEKIELSFSRTWNASSTTALPLNIDKRFVMLRNSSGFYSYA
IFERLKGWPAVELDNIRLVFKLNQDKFHYMAISDERQRYMPLPEDRIPPRGKPLAYPEAV
QLLDPIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFL
GSHVGPTNLAVFHSTHYVGAELIMSFEEGEAWKKVFGPVFIYMNSFPKGVDPLLLWTQAK
NQTKIEEEKWPYNFTGSSDYPSSDQRGSVTGRLLVRDRYIRSEDIPANGSYVGLAAPGDV
GSWQREYKGYQFWSKADEKGYFSINNVRTGRYNLYAFVPGFIGDYHNQTVFDISPGTNIS
LGDLVYEPPRDGVTLWEIGVPDRTAAEFYIPDPNPTFTNKLYLNRSDKYRQYGLWERYAE
LYPHEDMVYNVDVDDYSKNWFYMQVTRKQADGGYNGTTWQIKFQLNDKMKNFTGNFKLRI
ALATSNVAELQVRVNDLSVDPPLFTTGEIGKDNTIARHGIHGLYWLYSVNVPASSLRHGN
NTIYLTQPLAISPFQGLMYDYIRLECPDSISHLT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagttgtcttcacatgtttaccagctcgtggcgaccataggttaccggagacac
ttattgaaacagggaggatggatcatttctttgatcatgttcttgtctttgtttgaaatt
gcaatctcccaaaaccaaagttctgatccagaatcaacacaagtcttgcagttacattac
caagatggacatgtggtggtggacaatggcattttacaattaactttgtcaaatcctgag
ggatttgtaaccggaatacggtacaatggtatcgaaaatgtacttgcctacaccggcaat
gaacatgatagaggttactgggacttagtgtggaactttccagggaaaaaagttaagaag
tccaaaggcacattagaccggattgaagcaacaaagatggaagtgataacgcagagcgat
gaaaagatagagctatcgttttcaaggacatggaatgcttcttcaacgacggctcttcct
ctgaatatagacaagaggtttgtaatgctgcgaaactcgtcagggttctacagttacgcc
atcttcgagaggctaaaagggtggcctgctgttgaactcgataatattcgattagtattt
aagctaaaccaggacaagtttcattacatggcgatttcagatgagaggcaaaggtacatg
ccactaccagaagatcggattcctcctcgaggtaaacctcttgcttaccccgaggccgtt
caacttctcgaccctatcgagcctgagtttaaaggagaggtggatgacaagtatgaatac
tcaatggagagtaaagacataaaagttcatggatggataagcacaaatgactcggttggt
ttctggcaaatcactccgagcaacgagttccgatctgctggtcctctcaagcagttccta
ggctcccatgtcggtccaaccaacctcgcggtattccacagcactcactatgttggagca
gaactcatcatgagttttgaagaaggtgaagcatggaagaaagtgtttggacctgtcttt
atttatatgaactcgtttcctaaaggagttgatcctctcttgctatggactcaggccaag
aaccagacaaagattgaagaagagaaatggccttataacttcacagggtcaagtgactac
ccttcatctgaccaaagaggatctgttaccggtcgattacttgtccgagaccgatacata
aggagtgaggatatacctgcgaatgggtcctacgttggtttggctgcaccaggagatgtt
ggctcatggcaaagagaatacaaaggttatcagttctggtcaaaggccgacgagaaggga
tacttttctatcaacaatgtgagaactggtcgttacaatctctatgcatttgttcctgga
ttcatcggtgattaccacaaccagacggttttcgacatctctccaggtacgaatattagc
ctaggcgacttggtgtatgaacctccaagagacggtgtaactctatgggagatcggtgta
ccagaccgaaccgctgcagagttctacattcctgaccctaacccgacgtttactaacaaa
ctatacctaaaccgttctgataaatacagacaatatggattatgggaacggtatgccgaa
ctgtacccccatgaagatatggtttacaatgttgatgttgatgattactccaaaaactgg
ttctacatgcaagttacaaggaagcaagcagatggaggatacaatggtactacatggcag
atcaagtttcaactcaacgataaaatgaaaaattttactggaaatttcaaactgaggatc
gctctagccacatcaaatgtagcagaacttcaggttcgggtgaatgatttatcagtggat
ccaccattgtttacaacgggggagataggaaaggataatacgattgcaagacatggtata
catggactctattggctatacagtgtgaatgttccagcttcttctctccgccatgggaat
aacactatatatctaacccaaccgcttgccataagcccttttcaaggactcatgtatgac
tatattcgtctcgagtgtcctgattccatcagtcatctcacttag
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