KEGG   Brassica napus (rape): 106401784
Entry
106401784         CDS       T04128                                 
Name
(RefSeq) protein LHY-like
  KO
K12133  MYB-related transcription factor LHY
Organism
bna  Brassica napus (rape)
Pathway
bna04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:bna00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    106401784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bna03000]
    106401784
Transcription factors [BR:bna03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters Myb, Myb-factors
    106401784
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_7 Myb_DNA-bind_6 DUF5134
Other DBs
NCBI-GeneID: 106401784
NCBI-ProteinID: XP_013697818
UniProt: A0A078FL85
LinkDB
Position
C5:475058..478940
AA seq 624 aa
MDTNTSGDELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEAEAKGIPVCQALNIEIPPPRPKRKPNTPYPRKPGNNGPSSSQVPS
SAKHVSSASSSQCNQAFLDLEKVPISEETSNKKENQDDNCSGVSTVNKCPLPKKVTQPSL
RKESADNGTSKKASNVESAKCTQFQFHPPGMVSQDLMFCPMGDRVHGHVNLPATTTSSAT
TTTTTSQQAFPACPSQDSFLHFSSTFPNLIISSLLQNPAAHAAATFAASVWPYSNVGNSG
GDSSTQMSSSPPNVAAIAAATVAAATAWWASHGLIPVCAPPAPVTCLPLPTFAVPTQATD
KIDTVENDQLPLEKQNTALQDKKMASKSPASSSDDSEETGVTKLNAGSKTNGDKEEVVVD
AAAAAAAALHDPNASPKKKLVDRSSCGSNTPSGSDAETDALDKMEKDNEDVKEADANQQP
SVIELSNRRSKIRDNNNNQTTDSWKEVSQGGRKAFQALFARQRLPQSFSPPQVAAENVNG
KQSDTSMPMAPDLNKVQDSCDADQESGVVMIGDGTGKSLKTRQSGFKPYKRCSMEAKESQ
DGNANNESDEKVCKRIRLEGEAST
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggatacaaatacatccggagatgagttattaaccaaggcaagaaagccgtatactatt
acaaagcagcgggaacgatggacagaggatgagcatgataggtttcttgaagccttgagg
ctttatggaagggcctggcaacgtatagaagaacatattgggacaaagactgctgttcag
ataagaagtcatgcacaaaagttcttcacaaagctggagaaagaggcagaagctaaaggc
attcctgtttgtcaagctctcaacatagagatcccacctcctcgtcctaaaaggaaaccc
aatactccttatcctcgtaaacctggcaataatggcccatcttcctcgcaagtaccatca
tcagcaaaacatgtatcctcagcctcttcttcacaatgtaaccaggctttcttggatttg
gaaaaagtgcccatctctgaggaaacatcaaataagaaagaaaatcaagatgataactgc
tcaggggtttctactgtaaacaagtgtcccttgccaaagaaagttactcaaccgtctcta
agaaaggaaagtgccgataatggaacaagtaagaaggcgtcaaatgtggagagtgcaaaa
tgcactcagtttcagtttcatcccccaggtatggtctctcaagacttgatgttttgtcct
atgggagatcgtgttcacgggcacgtgaatcttccagctaccacaacatcctctgctact
actactacaactacttctcaacaggcgtttcctgcgtgcccttcccaggattcgtttctc
cacttctcctctactttccccaatctcattatctcaagcctcctacagaatcctgcagct
catgccgcagccacattcgctgcttcggtctggccctattccaacgtcgggaactcggga
ggagattcatcaacgcaaatgagctcttctcctccaaatgtagctgccatcgctgctgct
acggtagctgccgcaactgcttggtgggcttctcatggacttattcctgtatgtgctcct
cctgctccagtcacttgccttccattaccaacctttgcagttccaactcaggctacggat
aagatagataccgttgaaaatgatcaactaccgctggagaaacaaaacacagctctgcaa
gataaaaaaatggcttcaaaatctccagcttcatcatccgacgattcagaagagactgga
gtaaccaagctaaacgctggctcaaagacaaatggtgacaaggaggaagttgttgttgat
gctgctgctgctgctgctgctgctttgcatgatccaaacgcttccccaaagaaaaagctg
gtggaccgctcatcgtgtgggtcaaacacaccttcagggagtgacgcggaaacagatgcc
ttagataagatggagaaagataacgaggatgtgaaggaggcagatgcaaaccagcagcca
agtgttattgagttgagcaaccgtcggagtaaaatcagagacaacaacaacaaccaaact
actgattcgtggaaagaagtctcccaagggggtcgtaaagcgtttcaggctctctttgca
agacagagattgcctcagagcttttcacctcctcaagtggctgcagagaatgtgaatggg
aagcaaagtgacacgtcaatgccgatggctcctgatctcaacaaggttcaagattcttgt
gatgcagaccaagagagtggagtagtaatgataggtgatggaacggggaagagccttaaa
acgagacaatcagggtttaagccatacaagagatgttcaatggaggcgaaagagagccaa
gatgggaacgcaaacaatgaaagcgatgaaaaagtctgcaagaggattcgattggaagga
gaagcttcaacataa

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