Brassica napus (rape): 106401806
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Entry
106401806 CDS
T04128
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106401806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106401806
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106401806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
106401806
NCBI-ProteinID:
XP_013697853
UniProt:
A0A816L7Y5
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Position
C5:41737528..41739841
Genome browser
AA seq
312 aa
AA seq
DB search
MANLPPSLSMGTPFGGPSTSVGAPANKDRNLASAEQLVLDLSNPELRENALLELSKKREL
FQDLAPLLWNSFGTIAALLQEIVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRM
LFLKAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCL
RTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAERFFAVGRVLGNMVQSLVEQPSPRL
LKHIIRCYLRLSDNPRACAALGSCLPDSLRDGTFSNCLREDQIARRWLQQLVHNVGVGRV
PSHQGGGFEHML
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctacctccatctctctccatgggcacacctttcggcggtcccagcacgtcg
gtcggagctccggcgaacaaagatcgaaacttggcctccgcggagcagttggttctcgat
ctaagcaatcctgaactcagagagaatgctctcctcgagctttccaagaaaagagaactg
tttcaggatttggcgcctctcttgtggaactcttttggtaccattgctgccttgttgcag
gagatagtgtcaatctactctgttctcgcacctccaaatctgactcctgctcagtccaac
cgtgtctgcaactcactcgcccttcttcagtgcgtagcctctcattccgacacaaggatg
ttatttttgaaggctcacattccgttgtacctttaccccttcctgaacacaacgagtaag
tcaagacctttcgagtacttgcgccttactagcttaggtgtcattggtgctcttgtcaag
gttgatgatacagaggtcattagcttccttctatcaaccgaaattattcctctgtgcctc
cgcaccatggagatggggagcgagctgtcgaaaactgttgccacattcatagttcagaag
atcttgttagatgatgtggggatggattacatctgcacaacagcagagcgttttttcgct
gttggtcgagtgttgggaaatatggtccagtcacttgttgagcagccttctccacgtctt
ttgaagcatatcatccgttgttacctccgtttatcagacaaccctagggcgtgtgctgca
ctcggaagctgtctccctgactcgctgcgagatggaaccttcagcaattgtcttcgcgag
gatcaaatcgcgaggaggtggctgcaacagctggttcacaatgttggagttggtcgagtc
ccatcacatcaaggtggaggatttgagcacatgctttga
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