Brassica napus (rape): 106401888
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Entry
106401888 CDS
T04128
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106401888
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
106401888
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
106401888
Prokaryotic type
106401888
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
106401888
NCBI-ProteinID:
XP_013697951
UniProt:
A0A078GYD8
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Position
C5:complement(47842626..47847085)
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AA seq
926 aa
AA seq
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MLTSMPHHNLTLLGFSPLKSSSFALFLRPFSLYPILASSPRRPRAAGYRRSDPSPRFPPR
RKWSSFEEESRQRKGMSSSSDSFEFNKRRAEGKDKIDQPKKSLKRNTRTLNPTNTIAYVQ
ILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAG
GLPGLLLTLAGIGEDGLSVNVWGPSDLKYLVDAMRSFIPRAAMVHTRSFGPSDSTPQIGG
SSKAKEDPFVLVNDEVVKISAILLEPSPSEEPGNKSGETSVVYVCELPEINGKFDPAKAM
ALGLRAGPKYGKLQSGQSVKSDFKDITVHPSDVMGPSVPGPVVLLVDCPAESHAEELLSA
PSMKSYYSADGDKFVNCIIHLSPASVTNSATYQSWMKRFHSAQHILAGHETKNMEFPILK
ASSRITARLNYLCPQFFPAPGFWSPQHATDLTNPDSSSKCFGSSLGENVSAENLLKFTLR
PHVNLGLDRSCIPSQLTSSRVIDELLSEIPEISSKTEEVKRLWNGPHNNKMMIEEPWLNE
STVPSCLENIRRDDMEIVLLGTGSSQPSRYRNVSAVYIDLFSRGSILLDCGEGTLGQLKR
RYGLEGADEAVRNLKCIWISHIHADHHTGLARILARRRELLKGGAHEPVIVVGPRPLKNF
LDAYQRLEDLDMEFLDCRNTTSTSWASLETTSPEKTTSNGSAEGSLFSKGSPMLSIYKRP
SSPVTDNASALPYLKKLKRVLGEMGLEDLISFPVVHCPQAFGVVLKAAERKNMAGDKIPG
WKMVYSGDTRPCPQMVEASKGATVLIHEATFEDALVEEAVAKNHSTTKEAIDVGSSAGVY
RIILTHFSQRYPKIPVIDESHMHNTCIGFDMMSINMADLHVLPKIVPYFKNLFRNVVVDD
EDGEGEEESDDGLMMSVNKVSSFFRN
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttcaatgcctcatcataacctaacccttctcggcttctctcctctaaagtct
tcttctttcgctctcttcctccgacccttttccctctacccaatcctcgcctcttctcct
cgccgtcctcgcgccgctggttaccgtcgcagtgacccttctcctcgcttccctccgcga
cgcaagtggagcagcttcgaggaggagagtaggcagaggaaaggtatgtcttcttcttca
gattccttcgagtttaacaagagaagagctgagggaaaggataagatcgatcagcctaag
aagagtctcaagaggaacactcgcacgcttaaccctaccaacaccattgcctatgtccag
atacttggaacggggatggatacacaggatacatcgccttctgtgttactcttctttgac
aaacaaagattcatctttaatgctggagagggcttgcaacgtttctgtacagaacataaa
attaagttatcaaaggtggatcatatatttttgtctcgtgtgtgctcagagacagcaggt
ggacttccaggtcttctactgactctagctggtattggtgaagatggtttatccgtgaac
gtatggggtccttcggatctcaagtacttagttgacgctatgaggtcattcatccctcgt
gccgcaatggttcacacacgaagttttggtccatctgactccacgcctcaaattggcggc
tcaagtaaagccaaagaagatccattcgttcttgtaaatgacgaagttgtgaaaatctcc
gctattctcctcgaaccaagtccttcagaggaaccaggaaacaaatctggtgaaacgtcg
gttgtgtatgtatgcgagttacctgaaatcaacggaaaatttgatccggccaaggccatg
gctcttgggctcagagccggtcctaaatacggtaaactccagtctggacagtcggtgaag
tcagatttcaaagatatcacggttcatccgagtgatgtgatgggaccttcggttcctggt
cctgttgttttgcttgtggactgtccagcagagtcacacgccgaggaactgctatctgct
ccatcgatgaagagttattattcagccgatggggataagtttgttaattgtattatacat
ttgagtccagcttctgtgacgaatagtgcgacttaccagagctggatgaagaggtttcat
tctgctcagcacattctcgctggacatgaaacgaagaatatggagtttcccatcttgaaa
gctagttctagaatcacagctagacttaactatctatgcccacagttctttccagctcct
ggattttggtctcctcaacatgcaactgacttgacaaatccagattcttctagcaagtgc
tttggttcaagtcttggtgaaaacgtttcggctgaaaatctcctcaagttcactctgcgt
ccacatgttaacctcgggttagacagatcttgtatccctagtcagttaacttcctcgcgt
gtaatagacgagttactttcagagattcctgagatcagctccaagaccgaagaagtcaag
cggttatggaacggaccacacaacaacaagatgatgatcgaagagccgtggctgaacgag
agcactgtcccaagctgtcttgaaaacatcagacgagacgacatggagatagttctttta
ggcaccggttcatcccaaccttcaagatacagaaacgtcagtgcggtttacatcgacctg
ttctctagaggtagcattctcttggactgtggggaaggcactttaggccagcttaaacga
agatacggtttagaaggagctgatgaagcggtcagaaacttgaagtgtatatggatctct
cacatccatgctgatcaccacacgggacttgcgagaatccttgctcgtagacgtgagctt
ttgaaaggaggggctcatgagccggtgattgtggttggaccgaggccgcttaagaacttt
ctcgatgcgtatcaaagactcgaggatttagatatggagtttcttgattgtaggaacacc
acctcaacgtcttgggcttctctagaaaccaccagccctgagaaaactaccagcaacggt
agtgcagaaggttctttgtttagtaaaggaagtccaatgctgagtatatacaaaagaccg
agtagcccagtaacggacaatgcttcagctttaccgtacttgaagaaactgaaaagggtt
ctaggagaaatgggtttagaggatttgattagttttcctgttgtgcattgccctcaagcc
tttggggttgttttaaaagcagcagagagaaagaacatggccggagataagattccgggt
tggaaaatggtttactcaggcgacacaaggccttgtcctcagatggttgaagcttcaaaa
ggagcaactgttcttatacatgaggccacgtttgaggatgcgttggtagaagaagctgtt
gctaagaaccatagcacgactaaagaagcaatcgacgttggatcatcggcaggagtgtac
aggatcatactgactcattttagccagaggtatccgaagattccggtgattgacgagtca
catatgcacaacacatgcattggtttcgatatgatgagtataaacatggcggatttacat
gtgcttccgaagattgttccttacttcaaaaacctgttcagaaacgtggtggttgatgat
gaagatggtgaaggagaagaagagagtgatgatggtttgatgatgagtgtcaacaaagtc
tccagctttttccgcaattag
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