Brassica napus (rape): 106401977
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Entry
106401977 CDS
T04128
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 10, mitochondrial
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
bna
Brassica napus (rape)
Pathway
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106401977
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bna01006
]
106401977
Enzymes [BR:
bna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106401977
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
106401977
2.5.1.29 geranylgeranyl diphosphate synthase
106401977
Prenyltransferases [BR:
bna01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106401977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
106401977
NCBI-ProteinID:
XP_013698060
UniProt:
A0A078GYY5
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Position
C5:complement(42755151..42756601)
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AA seq
350 aa
AA seq
DB search
MENRETLVYILICIFLSLHFLFWRFRPRYTEVTSVFRLTNHLNIRSLASVTSYNFDFMLY
MVNKAKSVNKALDKAVPLCKPALKIRESMRYTLLSGGKRVRPMLCLAACELVGGQESTAM
PTACAVEMLHASSLIQDDLPCMDDDNLRRGKPTNHKVYGEDISVLTADALIALAVKKMAA
STSLGVPPERVLRAILEMTKALGTEGLVAGQAADLAGEGMSGLGLEYLEFIHIHKTAALL
EASAVAGAIVGGGSDEEIERLRMYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLVAGK
LTYPRFMGVEKSKEYAEKLNVEAREHLQGFDSQKVAPLLSLADYIVNRQN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagagaaactcttgtttacattctcatttgcatctttctctctctccacttc
ttgttttggagattcaggccgcgttacactgaagttacgtctgtcttcagactgaccaac
caccttaacatccgcagtttagcttcagtaacaagctataacttcgacttcatgttgtat
atggtcaataaggctaagtctgtcaacaaagcactagacaaggctgttcctctctgcaag
ccagcactcaaaatccgtgaatccatgaggtacacacttctctcgggtggaaaacgtgta
aggccaatgctttgcttagctgcgtgcgagctcgtaggcggccaagagtccaccgcaatg
cccactgcatgtgcggttgagatgcttcacgcgtcatctctcatccaagacgacctccct
tgtatggatgacgacaaccttcgtcgtggaaaacccaccaaccataaagtatatggtgaa
gatatatccgtcttgaccgctgatgcactcatagctttggctgtcaagaagatggccgcg
tctacctctttgggcgttcctccagagagggttctccgggctattctggagatgacaaaa
gcgttgggaacggaagggctcgttgcgggtcaagcggctgatctggccggagaaggaatg
agcggattggggttggaatatcttgagtttatacatattcacaaaacggcggcgttgctt
gaagcttctgcggtggcgggggctatagtgggaggtgggtctgatgaagagattgaaagg
cttaggatgtatgcaagatgcattgggcttatgtttcaagttgtggatgatgttcttgac
gtgacaaagtcgtcggaggagttggggaagacggccggtaaagatttggtggccggaaag
ctaacgtatccgaggttcatgggagtggagaagtcgaaggagtatgcggagaagttgaac
gtagaagcgagagagcatcttcaagggtttgattcacaaaaggtggcgcctttgttgtct
ctcgctgattacattgtcaaccgacaaaactaa
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